Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2201 |
Symbol | |
ID | 8013211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 2202972 |
End bp | 2204144 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644824787 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002976017 |
Protein GI | 241204921 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.122287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTTTC GAACGAAATC ATTGGGTTGT ACGCTTGTCC TGGCGCTGAT ATTCGGCGCC GACCTGCCGG CTTACGCACA GGAAGGCGGC GCGATGCCGC CAACAGCCGT CAGCGTCCTG ACGCTCAACG CGCGTCCGGT TCCCGTTATC AGCGAATTGC CCGGCCGCAT TGCCGCGACG CGCGTTTCCG AAGTGCGGGC CAGGGTTTCC GGCATCCTGC AGGAACGGAT CTTCGAGCAG GGCAGCCTCG TTCATCAGGG CGATGTGCTC TACCGGATCG ATCCAGCGCT TTTCCGGGTC CGTGTGGCCA GTGCGGAAGC AAGCCTCGAT CGCGCCAGGG CGACGCAGCT GAATGCCCGC CAGCAGCTGG ACCGGCAGAA GTCGCTGCGC GACCGTGATG TTGCAAGCGG TATCGAATAT GATGCGGCCG CCGTCGCCCT TGCCCAGGCC GATGCCGATG TCGCGCTGGC GCAGGCCGCA CTCGACGAAG CGAAGATCAA TCTCGGCTAT ACCGAAGTCC GCGCACCGAT ATCAGGCATC ATCGGCGGCG CGCTGGTGAC GGAAGGCGCG CTGGTGACGG CCGATGGAGG CGATGCGCTG GCGATGATCC AGCAGATTGA CCCCGTTTAT GCCGACTTTA TGCAATCCTC CGGAGACCTG CTGGCGTTGA AGCGGGCGGT CGAGAACGGC AGCCTCACAT CGACCGAACC AGGCAAGGCC GACATCAAGC TCGTCTTCGA CGACGGCACC GTCTATGGCG AAGCCGGGAA GCTGCTCTTC AGCAGCGCCA GCGTCGATGC GACGACGGGC CAAGTCACCC TCCGCGGTGA ATTCCCCAAT CCGAAGGGCG ACCTGCTGCC CGGTCTTTAC ATCAGGGTGC GCATCGAACA GGCCGTCCGA GAGAAGGCAA TCCTTATCCC GCAACGCGCC GTCATCCGCA CGGCCGACGG CAAGGCGCAG GTCTACGTCG TCCAGGAGGG AGACGTGGCA CAGCCGCGGG ACGTGGAGCT CGGTCAATCC TTCGGCAATG AATGGGTGGT CGAAAGCGGT CTGTCATCAG GTGAGCGTCT CGTTGTCGAC GGCAGCCAAA AGCTGCAGCC GGGCGCAAAG GTCGCGCCGG AAGAGTGGCG GGATGGCCAG CTCGCGTCCG GTGACGCCAA GAAGCCGGAG TAA
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Protein sequence | MLFRTKSLGC TLVLALIFGA DLPAYAQEGG AMPPTAVSVL TLNARPVPVI SELPGRIAAT RVSEVRARVS GILQERIFEQ GSLVHQGDVL YRIDPALFRV RVASAEASLD RARATQLNAR QQLDRQKSLR DRDVASGIEY DAAAVALAQA DADVALAQAA LDEAKINLGY TEVRAPISGI IGGALVTEGA LVTADGGDAL AMIQQIDPVY ADFMQSSGDL LALKRAVENG SLTSTEPGKA DIKLVFDDGT VYGEAGKLLF SSASVDATTG QVTLRGEFPN PKGDLLPGLY IRVRIEQAVR EKAILIPQRA VIRTADGKAQ VYVVQEGDVA QPRDVELGQS FGNEWVVESG LSSGERLVVD GSQKLQPGAK VAPEEWRDGQ LASGDAKKPE
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