Gene Rleg_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2201 
Symbol 
ID8013211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2202972 
End bp2204144 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content64% 
IMG OID644824787 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002976017 
Protein GI241204921 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.122287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTC GAACGAAATC ATTGGGTTGT ACGCTTGTCC TGGCGCTGAT ATTCGGCGCC 
GACCTGCCGG CTTACGCACA GGAAGGCGGC GCGATGCCGC CAACAGCCGT CAGCGTCCTG
ACGCTCAACG CGCGTCCGGT TCCCGTTATC AGCGAATTGC CCGGCCGCAT TGCCGCGACG
CGCGTTTCCG AAGTGCGGGC CAGGGTTTCC GGCATCCTGC AGGAACGGAT CTTCGAGCAG
GGCAGCCTCG TTCATCAGGG CGATGTGCTC TACCGGATCG ATCCAGCGCT TTTCCGGGTC
CGTGTGGCCA GTGCGGAAGC AAGCCTCGAT CGCGCCAGGG CGACGCAGCT GAATGCCCGC
CAGCAGCTGG ACCGGCAGAA GTCGCTGCGC GACCGTGATG TTGCAAGCGG TATCGAATAT
GATGCGGCCG CCGTCGCCCT TGCCCAGGCC GATGCCGATG TCGCGCTGGC GCAGGCCGCA
CTCGACGAAG CGAAGATCAA TCTCGGCTAT ACCGAAGTCC GCGCACCGAT ATCAGGCATC
ATCGGCGGCG CGCTGGTGAC GGAAGGCGCG CTGGTGACGG CCGATGGAGG CGATGCGCTG
GCGATGATCC AGCAGATTGA CCCCGTTTAT GCCGACTTTA TGCAATCCTC CGGAGACCTG
CTGGCGTTGA AGCGGGCGGT CGAGAACGGC AGCCTCACAT CGACCGAACC AGGCAAGGCC
GACATCAAGC TCGTCTTCGA CGACGGCACC GTCTATGGCG AAGCCGGGAA GCTGCTCTTC
AGCAGCGCCA GCGTCGATGC GACGACGGGC CAAGTCACCC TCCGCGGTGA ATTCCCCAAT
CCGAAGGGCG ACCTGCTGCC CGGTCTTTAC ATCAGGGTGC GCATCGAACA GGCCGTCCGA
GAGAAGGCAA TCCTTATCCC GCAACGCGCC GTCATCCGCA CGGCCGACGG CAAGGCGCAG
GTCTACGTCG TCCAGGAGGG AGACGTGGCA CAGCCGCGGG ACGTGGAGCT CGGTCAATCC
TTCGGCAATG AATGGGTGGT CGAAAGCGGT CTGTCATCAG GTGAGCGTCT CGTTGTCGAC
GGCAGCCAAA AGCTGCAGCC GGGCGCAAAG GTCGCGCCGG AAGAGTGGCG GGATGGCCAG
CTCGCGTCCG GTGACGCCAA GAAGCCGGAG TAA
 
Protein sequence
MLFRTKSLGC TLVLALIFGA DLPAYAQEGG AMPPTAVSVL TLNARPVPVI SELPGRIAAT 
RVSEVRARVS GILQERIFEQ GSLVHQGDVL YRIDPALFRV RVASAEASLD RARATQLNAR
QQLDRQKSLR DRDVASGIEY DAAAVALAQA DADVALAQAA LDEAKINLGY TEVRAPISGI
IGGALVTEGA LVTADGGDAL AMIQQIDPVY ADFMQSSGDL LALKRAVENG SLTSTEPGKA
DIKLVFDDGT VYGEAGKLLF SSASVDATTG QVTLRGEFPN PKGDLLPGLY IRVRIEQAVR
EKAILIPQRA VIRTADGKAQ VYVVQEGDVA QPRDVELGQS FGNEWVVESG LSSGERLVVD
GSQKLQPGAK VAPEEWRDGQ LASGDAKKPE