| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2200 |
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| Symbol | |
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| ID | 8013210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 2199814 |
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| End bp | 2202966 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644824786 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002976016 |
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| Protein GI | 241204920 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.139566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTT TCTTTATCGA TCGCCCGATC CTAGCCTGGG TCTTTGCGAT CTTCATCTCC
ATCGCTGGCC TGATCGCGCT GCCGTTCCTG CCGGTCGCCC AATATCCCAA GGTCGCGCCG
CCGCAGCTCA GCATCACCAC CAGCTATCCC GGCGCTTCGC CCCAGGATAT CTATCAGGGC
GTCACCCGCC AAATCGAGGA AGAGCTGAAC GGGGTCGAGC ACCTTTCTTA TTTCGAGTCG
ACGTCGGATA CATCGGGCGC GATGACGATC ACCGCGACCT TTGCGGCCGG CACCGATATC
GACCAGGCCT CCGTCGACGT TCAGAATGCC ATTCGCCGCG TCGAACCGCG GCTGCCGCAA
TCCGTCAAGG ATCAGGGCAT CACGGTCGAG GAGGCGTCGT CGGGCTTCCT GATGTTCATC
TCGCTGACAT CGACGGACGG GAAGACCGAC GAGGTGGCGC TCGGCGACTA TCTCAACCGA
AACGTCATCG GCGAGCTGCG CCGTCTCGAG GGCGTCGGCC GCGCCCAGCT ATTTGCGTCG
CAGAGGGCGA TGCGCATCTG GATCGATCCC GACAAGATGG TCGGCCTGAA CCTCACAGCA
TCCGACATCA GCGCGGCGAT CTCGGCGCAG AACGCCCAGG TCGCGGCGGG CCAGATCGGC
GCAGCACCCA ATCCGATCTC GCAAGACCTG ACGGCGACAG TGCTGGTCAA GGGGCAACTG
ACCGACATCA AGGAGTTCGG AGACATCGTG CTGCGCGCCA ATGCCGACGG ATCGAATGTC
CGGCTGCGCG ATGTCGCGCG CATCGAAGAG GGCAGCGAGA GTTATAGCTT CTCCACCCGC
TTGAACGGGC AGCCGAGCGC CGCCATTGCC ATCCAGCTGT CGTCGACGGG CAATGCCGTC
AACACTTCCA ATCTGGTCAA GGCGAAGATG GAGGAGCTGT CGCGCTTCTT CCCTGCTGGC
GTCGAATATT CCGTTCCCTA TGATACCAGC CCGTTCGTTT CGGCATCGAT CGAGAAGGTG
GCGCATACGC TCGCTGAAGC CGTGGCGCTC GTCTTTGTTG TCATGCTCAT CTTCCTGCAG
AGCTTCCGTT ACACCATCAT TCCGACGCTC GTCGTGCCGG TCGCGCTGCT CGGGACGCTT
GCTGTCATGT TTGCTGCCGG CTTCTCGATC AACGTGCTGA CGATGTTCGC GATGGTGCTT
GCCATCGGCA TTCTCGTCGA CGACGCCATC GTGGTGGTGG AAAACGTCGA GCGGCTGATG
GCGGTGGAAG GGCTGTCACC GAAGGAAGCG ACCAAGAAGG CGATGCGGCA GATCACCGGC
GCGATTCTCG GGATTACGCT GGTTCTCTCC TGCGTCTTCG TGCCGATGGC GTTCTTCCCA
GGCTCGACAG GCATCATCTA CCGTCAGTTC AGCCTGACCA TGGTCGTATC CATCCTGTTT
TCCGCCTTCC TGGCGCTGTC GCTGACGCCG GCGCTCTGCG CCACTTTCCT GAAACCGATC
AAGGGCCATC ACGAGAAGAA GGGCGTCGCC GGCTGGTTCA ACCGCAACTT CGACCGGCTG
ACCGGCCGTT ATGCCCGCAC CGTCGAGGGA CTGGCCAAGC GCTCCTGGCG GGTCATGGCC
GTCTATGTCG CGCTGCTCAT CGGCCTTGGC TATCTTTTCG TCAACCTGCC GAGCAGCTTC
GTGCCGGACG AGGATCAGGG CTTCCTGATC GTCGACGTGC AGGGACCGCC GGAGGCGAGC
CGCAACCGCA CGGTGGCCTC GCTCGAAAGC ATCGAGGCAA TCTTCAAGAA AGAGCCGGCC
GTTGCCAACG TCGTCGCGAT CCAGGGCTTC AGCTTCTCCG GGCAGGGACC GAACGCCGCC
CTGGTGTTTG TCACGCTCAA GGACTGGGCC GAACGCGGCG CCGGCAATTC GGTGCAGGAG
ATCTCCAACC GCGCCAATAT GCAGCTGTTT GGGCTGAAGG ACGCGACGTC CTTCGCGCTG
TCGCCGCCGC CGATCGAAGG GTTCGGCACG ACCAACGGCT TCACCTTCCG CCTTCAGGAT
CGCGGGGCGA AAGGCCAGGC GGCACTGACC GAGGCGGCGG GAATGCTGAT CGGCAAGGCA
TCGCAGAACC CCATCATCGC AGGTATCCGC CCGGAAGGCA TGCCTGACTC GGCCCAGCTC
GTGCTCGTCA TCGATCGCGA GAAGGCAAAT ACCTTCGGTG TCGCCTTCGC CGACATCAAC
AGCACGATCA CCGCCAATCT GGGTTCGAGC TATGTCAACG ACTTCCCGAA TTCGGGCCGC
ATGCAGCGCG TCATCGTGCA GGCGCAGGAC AAGAGCAGGC TTCAGGCGGA AGACCTGATG
AAGCTCAATG TCCGCAATGC GAGCGGCGGC ATGGTGCCGC TATCGTCCTT CGCCGTCGCC
GAATGGCAGA AGGGACCGGC GCAGATCGTC GGCTATAACG GCTACCCTTC CGTGCGTATC
TCTGGCGCTC CGGCGCCGGG ATATTCATCG GGGGCGGCGA TTACCGAAAT GGAGCGGCTG
GCCTCGGAAC TTCCCGACGG CTTCGGCTTC GAATGGACCG GCCAGTCGCT GGAGGAGCTG
AGATCGGGAT CGCAGGCGCC GTTCCTGTTC GGCCTCAGCA TCCTCTTCGT CTTCCTGCTG
CTGTCGGGGC TTTACGAGAG TTGGTCCATC CCGTTGTCGG TGATGCTGGT CGTGCCGCTT
GGCGTCATCG GCTGCGTGCT CGCGGTGATG AGCCGCGACA TGTCCAACGA CATCTACTTC
AAGGTCGGTC TGATCGCGAT CATCGGATTG TCGGCAAAGA ACGCCATCCT GATCGTCGAA
TTCGCCAAGG ACGGTTTTGC CGAGGGCAAA TCGCTGATGG ATGCCGCGAT CGAAGGCGCT
CGTCTGCGCT TCCGACCGAT CATCATGACC TCACTCGCCT TCACATTGGG CGTGGTGCCT
CTGGCGATCG CCACCGGGCC AAGTGCGGCG AGCCAAAATG CCATCGGCAC GGGCGTGCTC
GGCGGCATGA TCTCGGCGAC GGTGCTGGCG ATCTTCTTCG TTCCCGTCTT CTTCGTCTTC
GTGCTGCGTC TCTTGAGGAC GAAGCGGCCC GAGACTGTGA ACGAGGAGGC GGCGGCCGGG
CAGGAGCCGG CAACCGTGAC GTCGCCGACC TGA
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| Protein sequence | MARFFIDRPI LAWVFAIFIS IAGLIALPFL PVAQYPKVAP PQLSITTSYP GASPQDIYQG
VTRQIEEELN GVEHLSYFES TSDTSGAMTI TATFAAGTDI DQASVDVQNA IRRVEPRLPQ
SVKDQGITVE EASSGFLMFI SLTSTDGKTD EVALGDYLNR NVIGELRRLE GVGRAQLFAS
QRAMRIWIDP DKMVGLNLTA SDISAAISAQ NAQVAAGQIG AAPNPISQDL TATVLVKGQL
TDIKEFGDIV LRANADGSNV RLRDVARIEE GSESYSFSTR LNGQPSAAIA IQLSSTGNAV
NTSNLVKAKM EELSRFFPAG VEYSVPYDTS PFVSASIEKV AHTLAEAVAL VFVVMLIFLQ
SFRYTIIPTL VVPVALLGTL AVMFAAGFSI NVLTMFAMVL AIGILVDDAI VVVENVERLM
AVEGLSPKEA TKKAMRQITG AILGITLVLS CVFVPMAFFP GSTGIIYRQF SLTMVVSILF
SAFLALSLTP ALCATFLKPI KGHHEKKGVA GWFNRNFDRL TGRYARTVEG LAKRSWRVMA
VYVALLIGLG YLFVNLPSSF VPDEDQGFLI VDVQGPPEAS RNRTVASLES IEAIFKKEPA
VANVVAIQGF SFSGQGPNAA LVFVTLKDWA ERGAGNSVQE ISNRANMQLF GLKDATSFAL
SPPPIEGFGT TNGFTFRLQD RGAKGQAALT EAAGMLIGKA SQNPIIAGIR PEGMPDSAQL
VLVIDREKAN TFGVAFADIN STITANLGSS YVNDFPNSGR MQRVIVQAQD KSRLQAEDLM
KLNVRNASGG MVPLSSFAVA EWQKGPAQIV GYNGYPSVRI SGAPAPGYSS GAAITEMERL
ASELPDGFGF EWTGQSLEEL RSGSQAPFLF GLSILFVFLL LSGLYESWSI PLSVMLVVPL
GVIGCVLAVM SRDMSNDIYF KVGLIAIIGL SAKNAILIVE FAKDGFAEGK SLMDAAIEGA
RLRFRPIIMT SLAFTLGVVP LAIATGPSAA SQNAIGTGVL GGMISATVLA IFFVPVFFVF
VLRLLRTKRP ETVNEEAAAG QEPATVTSPT
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