Gene Rleg_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2122 
Symbol 
ID8013144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2115709 
End bp2116026 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content60% 
IMG OID644824708 
ProductTfoX domain protein 
Protein accessionYP_002975938 
Protein GI241204842 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00485097 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGACAATG CCGGGATCGA GGAAATGTTT CAGGGGCTCG GCCCCGTCAC GGTCAAGCGC 
ATGTTTGGCG GCAAAGGCAT CTATCATCTC GGGCGGATCA TCGCGCTTGA AGTGCGCGAC
GAGATGCTGC TGAAGGCCGA TGAGACGAGC GCCCCGGAAT TTGCCGCTGC CGGCGCCACG
CAATGGACTT ATGAGGGCAA GAAGGGCAAG CCGGTAAAAA TGCCCTATTG GTCGATCCCC
GACGAGGCCT ACGACGATCC CGATCTGATG GCGAAATGGG TGAGGCTTGC CTATGAGGCG
TCGCTTCGCG CCGAATAG
 
Protein sequence
MDNAGIEEMF QGLGPVTVKR MFGGKGIYHL GRIIALEVRD EMLLKADETS APEFAAAGAT 
QWTYEGKKGK PVKMPYWSIP DEAYDDPDLM AKWVRLAYEA SLRAE