Gene Rleg_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2005 
Symbol 
ID8013040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2000879 
End bp2001775 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content69% 
IMG OID644824592 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002975823 
Protein GI241204727 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.140319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAC CCGATCTCAA CTTGCTGGTC ACTCTCGATG TGCTGCTTGC CGAGGGCAGC 
GTTGCGCGTG CGGCACAAAG GCTGCGGCTC TGCCCGTCGG CGATGAGCCG GGCCTTAGCG
CGATTGCGCG AAACGACGGG CGATCCGCTG CTGGTGCGCG CCGGCCGCGG CCTCGTCCCC
ACGCCGCGCG CGCTCGAACT GCGCGAGCGG GTCGGCCGGA TTGTCGAGGA CGCGCAGGCG
GTCCTGCGTC CTGCCGAGGC GCTTGATCTT CAACGCTTGG TCCGGACGTT CACCTTGCGC
ACCAGCGAAG GCTTTGCCGA GAGCTTCGGA CCTGATCTTA TCGCACGCCT CGGCCGGCAA
GCGCCCGGCG TGCGGCTGCG CTTCGTGCAG AAGCCGGACA AGGACAGCGC CCCGCTTCGC
GACGGGACCG TCGATCTGGA AACCGGCGTC GTCGGCGGGA CGACCGGGCC GGAGGTGCGG
GCGCAGGCCT TGTTCCGCGA TCGTTTCATC GGCGTCGTGC GCTTGGGGCA TCCGCTTTGC
GAGCGCGAGT TGACGCCCTC CCTTTATGCC GCCGGCCAGC ACATCTACGT CTCACGGCGC
GGGCTCGACA AGGGACCGAT CGATGAAGCC TTGACCGCGC TCGGGCTGGA GCGGCAGATC
GCCACCATCG TCAGCGGCTT TTCCACGGCA CTGGCGCTCG CCCGAACCTC CGATCTGATC
GCCAGCGTGC CCGAACGGCA CACCGGAGCC TTGCGCGCGG GAATGCATAG TTTCCCCCTC
CCCGTCCCGA CGCCCGAGAT CACGGTGTCA TTACTCTGGC ACCCCAGGAT GGATGCCGAT
CCCGCGCATC GCTGGCTGCG CGGCTGCGTT CGGGACGCCT GCGCGCGCGC TGATTGA
 
Protein sequence
MSTPDLNLLV TLDVLLAEGS VARAAQRLRL CPSAMSRALA RLRETTGDPL LVRAGRGLVP 
TPRALELRER VGRIVEDAQA VLRPAEALDL QRLVRTFTLR TSEGFAESFG PDLIARLGRQ
APGVRLRFVQ KPDKDSAPLR DGTVDLETGV VGGTTGPEVR AQALFRDRFI GVVRLGHPLC
ERELTPSLYA AGQHIYVSRR GLDKGPIDEA LTALGLERQI ATIVSGFSTA LALARTSDLI
ASVPERHTGA LRAGMHSFPL PVPTPEITVS LLWHPRMDAD PAHRWLRGCV RDACARAD