Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2005 |
Symbol | |
ID | 8013040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2000879 |
End bp | 2001775 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644824592 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002975823 |
Protein GI | 241204727 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.140319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGACAC CCGATCTCAA CTTGCTGGTC ACTCTCGATG TGCTGCTTGC CGAGGGCAGC GTTGCGCGTG CGGCACAAAG GCTGCGGCTC TGCCCGTCGG CGATGAGCCG GGCCTTAGCG CGATTGCGCG AAACGACGGG CGATCCGCTG CTGGTGCGCG CCGGCCGCGG CCTCGTCCCC ACGCCGCGCG CGCTCGAACT GCGCGAGCGG GTCGGCCGGA TTGTCGAGGA CGCGCAGGCG GTCCTGCGTC CTGCCGAGGC GCTTGATCTT CAACGCTTGG TCCGGACGTT CACCTTGCGC ACCAGCGAAG GCTTTGCCGA GAGCTTCGGA CCTGATCTTA TCGCACGCCT CGGCCGGCAA GCGCCCGGCG TGCGGCTGCG CTTCGTGCAG AAGCCGGACA AGGACAGCGC CCCGCTTCGC GACGGGACCG TCGATCTGGA AACCGGCGTC GTCGGCGGGA CGACCGGGCC GGAGGTGCGG GCGCAGGCCT TGTTCCGCGA TCGTTTCATC GGCGTCGTGC GCTTGGGGCA TCCGCTTTGC GAGCGCGAGT TGACGCCCTC CCTTTATGCC GCCGGCCAGC ACATCTACGT CTCACGGCGC GGGCTCGACA AGGGACCGAT CGATGAAGCC TTGACCGCGC TCGGGCTGGA GCGGCAGATC GCCACCATCG TCAGCGGCTT TTCCACGGCA CTGGCGCTCG CCCGAACCTC CGATCTGATC GCCAGCGTGC CCGAACGGCA CACCGGAGCC TTGCGCGCGG GAATGCATAG TTTCCCCCTC CCCGTCCCGA CGCCCGAGAT CACGGTGTCA TTACTCTGGC ACCCCAGGAT GGATGCCGAT CCCGCGCATC GCTGGCTGCG CGGCTGCGTT CGGGACGCCT GCGCGCGCGC TGATTGA
|
Protein sequence | MSTPDLNLLV TLDVLLAEGS VARAAQRLRL CPSAMSRALA RLRETTGDPL LVRAGRGLVP TPRALELRER VGRIVEDAQA VLRPAEALDL QRLVRTFTLR TSEGFAESFG PDLIARLGRQ APGVRLRFVQ KPDKDSAPLR DGTVDLETGV VGGTTGPEVR AQALFRDRFI GVVRLGHPLC ERELTPSLYA AGQHIYVSRR GLDKGPIDEA LTALGLERQI ATIVSGFSTA LALARTSDLI ASVPERHTGA LRAGMHSFPL PVPTPEITVS LLWHPRMDAD PAHRWLRGCV RDACARAD
|
| |