| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1990 |
|---|
| Symbol | |
|---|
| ID | 8013026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 1987235 |
|---|
| End bp | 1988785 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644824577 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_002975809 |
|---|
| Protein GI | 241204713 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.950976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0073495 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA AGACACCCTT CTACATCACC ACCGCGATTT CCTACCCTAA CGGCAAGCCG
CATATCGGCC ATGCCTATGA GCTGATCGCG ACCGATGCGA TGGCGCGCTA CCAGCGCCTG
GATGGCAAGG ATGTGTTCTT CCTGACGGGC ACCGACGAAC ACGGCCAGAA GATGCAGCAG
ACGGCGCGCG CCGAGGGCAT CACCGCGCAG GCGCTCGCCG ACCGCAACTC CGGCGAATTC
CAGGCGATGG CGACGCTGCT CAACGCTTCC AACGATGATT TCATCCGCAC CACGCAGGAG
CGCCATCACG AGACGTCGCG CAACATCTGG AAGCTGATGG CCGACAATGG CGACATCTAC
AAGGACAGCT ATGCCGGCTG GTATTCGGTG CGCGACGAGG CCTACTACCA GGAAAACGAG
ACCGAGCTGC GCGCCGACGG CGTGCGTTAC GGGCCGCAGG GCACGCCCGT CGAATGGGTG
GAAGAGGCAA GCTATTTCTT CAAGCTCTCC GAATACCAGG AGAAGCTGCT TGCGCATTAC
GAGGCAAACC CTGATTTCAT CGGTCCGGCC GAGCGTCGCA ACGAGGTGAT CTCCTTCGTC
AAGTCGGGCC TCAAGGACCT CTCGGTCTCG CGCACGACCT TCGACTGGGG CATCAAGGTG
CCGGACGATC CCGCCCACGT GATGTATGTC TGGGTCGACG CACTGACCAA CTACATCACC
GCGACCGGCT ATATCGAGGA CAAGAACGGC CCGCGGGCGA AATACTGGCC GGCCGATGTG
CACATCATCG GCAAGGACAT CATCCGCTTC CACGCCGTCT ACTGGCCGGC CTTCCTGATG
TCGGCGAAGC TGCCGCTGCC GAAGCGGGTC TTTGCCCACG GCTTCCTGCT CAACAAGGGC
GAGAAGATGT CGAAGTCGCT CGGCAACGTC GTCGATCCGG TCAATCTGGT GAACCATTTC
GGCCTCGACC AGGTGCGCTA TTTCTTCCTG CGCGAAGTCT CCTTCGGCCA GGACGGCAGC
TACAGCGAAG AGGCGATCGG CACGCGCATC AATTCCGATC TCGCCAACGG TATCGGCAAT
CTCGCCAGCC GCTCGCTGTC GATGATCGTC AAGAACTGCG ATGGCAAGAT CCCTGAATGC
GGGGCGCTCA GCGATGAGGA CAAGGCCATG CTGGCTGAGG TCGACGCGCT GCATGCATCG
ACCCGCGAGG AAATGGGTAA GCAGCAGATC CACCGGGCTC TCGCCTCGAT CATTTCGGTC
GTCTCCGAGA CCGACCGTTA TTTCGCCGGC CAGGCGCCGT GGGCGCTGAA GAAGACCGAT
CCGGAGCGTA TGGGCACGGT GCTCTATGTG ACCGCCGAAG TCGTGCGCCA GATTGCCATC
CTGCTGCGAC CCTTCATGCC GGATTCATCA GGCAAGCTGC TCGATCTGGT CGCGGCACCT
GCAGACAAGC GCGATTTTGC TGCCCTCGGC GAAGCCGGCC GTCTCACTGC CGGAACGACC
CTCGAAGCGC CGACGCCGGT CTTCCCGCGC TACGTGGCTC CGGAGGCTTG A
|
|---|
| Protein sequence | MTDKTPFYIT TAISYPNGKP HIGHAYELIA TDAMARYQRL DGKDVFFLTG TDEHGQKMQQ
TARAEGITAQ ALADRNSGEF QAMATLLNAS NDDFIRTTQE RHHETSRNIW KLMADNGDIY
KDSYAGWYSV RDEAYYQENE TELRADGVRY GPQGTPVEWV EEASYFFKLS EYQEKLLAHY
EANPDFIGPA ERRNEVISFV KSGLKDLSVS RTTFDWGIKV PDDPAHVMYV WVDALTNYIT
ATGYIEDKNG PRAKYWPADV HIIGKDIIRF HAVYWPAFLM SAKLPLPKRV FAHGFLLNKG
EKMSKSLGNV VDPVNLVNHF GLDQVRYFFL REVSFGQDGS YSEEAIGTRI NSDLANGIGN
LASRSLSMIV KNCDGKIPEC GALSDEDKAM LAEVDALHAS TREEMGKQQI HRALASIISV
VSETDRYFAG QAPWALKKTD PERMGTVLYV TAEVVRQIAI LLRPFMPDSS GKLLDLVAAP
ADKRDFAALG EAGRLTAGTT LEAPTPVFPR YVAPEA
|
|---|
| |