| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1905 |
|---|
| Symbol | |
|---|
| ID | 8012953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1891230 |
|---|
| End bp | 1892753 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644824494 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002975726 |
|---|
| Protein GI | 241204630 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.308353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.5938 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCACG ATTTCGAGAA CGTTCTCGCG GCCTCCGGAA TATCGAAATT CTTTCCCGGC
GCAGTGGCGC TGGATAAGGT CGATTTCACG CTCCGCAGAG GCGAGGTGCA CGCATTGCTG
GGCGAGAACG GCGCCGGCAA GTCGACGCTG ATCAAGTGCA TCACCGGCGC CTATCATCGT
GACGAGGGCA GCCTGATGCT GGAAGGCCAG GAAATCAATC CGGCCAATAC GCTCGCCGCC
CAGAAGCTCG GTATCGGCAC GGTCTATCAG GAGGTCAATC TCCTTTCCAA TCTGAGCGTC
GCCGAAAACC TCTTTCTCGG ACGCCAGCCA AGGCGCTTCG GCATGACCGA CGTGCGTTCG
ATGAACCGCA AGGCGCGCGA CCTGCTCGCC GGCTACGGCG TCGATATCGA CGTCACCGCC
GAGCTTGGCC GTTTTTCCGT CGCTGTCCAG CAGGTGGTAG CCATCGCCCG TGCCGTCGAT
CTCTCCGGCA AGGTGCTGAT CCTCGACGAG CCCACCGCAA GTCTCGACAA TCAGGAGGTG
GCGCTGCTCT TCCGCATCAT CGAAGACCTG AAGAAGCGCG GCCTGGGCAT TGTCTTCATC
ACCCATTTTC TCGAGCAGGT CTATGCGATC AGCGACCGTA TCACCGTGCT GCGCAACGGC
AAGCTCGTCG GTACCCGCGA CGCCGCCGAT CTGCCGCGCC AGGGCCTGAT CGCCATGATG
CTCGGCCGCG AACTGGCGCA TGTAGAAGAG ACCGTCAGGG AACGCAGCCT TGCGGCCGGC
GACGTCCGAT ATCATTTTGC AGGCTACGGC AAACGCGGCA AGGTCAAACC ATTCGATCTT
GAAGTGCGCG CCGGAGAGGT GGTCGGCGTC GCCGGGCTGC TCGGTTCCGG CCGCACCGAA
ACTGCCGAAC TGCTTTTCGG CATCGAGCAT GCCGACAGCG GCAGCGCCAC GATCGACGGC
CAGCCGGTGA CGATTTCGAG CCCGCGCGCC GCGATCGCAA AGGGTTTCGG CTTCTGCCCC
GAGGACCGCA AGACCGATGG CATCATCGGC GACCTGTCGA TCAGGGAGAA CATCGCACTT
GCGCTCCAGG CCCGCCGCGG CTGGACGCGG CCGCTGTCGC GCGCCGAACA GAACACGCTT
GCCGACCGCT ACATCAAGGC GCTCGATATC CGCACCACCG ATCGCGAGAA GCCGATCCGG
CTACTGTCAG GCGGCAATCA GCAAAAGGCG ATCCTCGCCC GCTGGCTGGC GACCAATCCG
AAGTTTCTGA TCCTCGACGA GCCGACCCGC GGCATTGATG TCGGTGCCCA TGCCGAGATC
ATCCGGCTCA TCGAAGAGCT CTGCGCCGGT GGCATGTCGC TCATCGTGAT TTCCTCGGAA
CTTGAAGAGC TTGTCGCCTA TAGTTCACGT GTCATCGTAC TTCGCGACAG ACAGCATATC
GCCGAACTGA CAGGCGAGCG TATCACCGCT GCCGGCATCG TCGAAGCCAT CGCCGCCGCC
GAACACAAGA TGGAGGATGC ATGA
|
|---|
| Protein sequence | MIHDFENVLA ASGISKFFPG AVALDKVDFT LRRGEVHALL GENGAGKSTL IKCITGAYHR
DEGSLMLEGQ EINPANTLAA QKLGIGTVYQ EVNLLSNLSV AENLFLGRQP RRFGMTDVRS
MNRKARDLLA GYGVDIDVTA ELGRFSVAVQ QVVAIARAVD LSGKVLILDE PTASLDNQEV
ALLFRIIEDL KKRGLGIVFI THFLEQVYAI SDRITVLRNG KLVGTRDAAD LPRQGLIAMM
LGRELAHVEE TVRERSLAAG DVRYHFAGYG KRGKVKPFDL EVRAGEVVGV AGLLGSGRTE
TAELLFGIEH ADSGSATIDG QPVTISSPRA AIAKGFGFCP EDRKTDGIIG DLSIRENIAL
ALQARRGWTR PLSRAEQNTL ADRYIKALDI RTTDREKPIR LLSGGNQQKA ILARWLATNP
KFLILDEPTR GIDVGAHAEI IRLIEELCAG GMSLIVISSE LEELVAYSSR VIVLRDRQHI
AELTGERITA AGIVEAIAAA EHKMEDA
|
|---|
| |