| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1819 |
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| Symbol | hfq |
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| ID | 8012876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1812292 |
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| End bp | 1812534 |
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| Gene Length | 243 bp |
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| Protein Length | 80 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644824410 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_002975643 |
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| Protein GI | 241204547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0798062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0504163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGAAC GTTCTCAGAA TCTTCAGGAC TTATTTCTCA ATACTGTTCG CAAGCAAAAG
ATTTCCCTGA CAATCTTTCT GATCAACGGC GTGAAACTCA CGGGCGTTGT TACGTCTTTT
GACAATTTCT GTGTTCTTCT TCGCCGTGAC GGCCATTCGC AGCTCGTGTA TAAGCATGCG
ATCTCGACGA TCATGCCGGG CCAGCCCATG CAGATGTTCG AGAGCGAAGA AGCAGCGTCC
TAA
|
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| Protein sequence | MAERSQNLQD LFLNTVRKQK ISLTIFLING VKLTGVVTSF DNFCVLLRRD GHSQLVYKHA
ISTIMPGQPM QMFESEEAAS
|
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| |