Gene Rleg_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1789 
SymbolgltA 
ID8012850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1780852 
End bp1782141 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content59% 
IMG OID644824380 
Producttype II citrate synthase 
Protein accessionYP_002975613 
Protein GI241204517 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.069091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00547545 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGATC AAAGCGCTAC AATAAAAATC GGTGACAAGT CTGTCGACCT TGCTGTCAAA 
AGCGGCACGA TCGGCCCGAG CGTCATCGAT ATCGGTGCCC TCTACAAGAA CACCGCTTCC
TTCACCTACG ATCCGGGTTT TACCTCGACC GCATCCTGTG AATCGAAAAT CACCTACATC
GACGGCGACG AAGGTGTCCT GCTGCATCGT GGCTATCCGA TCGAGCAGCT CGCCGAGCAT
GGCGACTTCC TCGAAGTCTG CTATCTCCTG CTTTACGGCG AACTGCCGAC CACCGTGCAG
AAGAAGGATT TCGATTACCG CGTTACGCAC CACACCATGG TACACGAGCA GATGAGCCGC
TTCTTCACCG GCTTCCGCCG CGATGCGCAT CCGATGGCCG TCATGTGCGG CTGCGTCGGC
GCACTGTCGG CCTTCTATCA CGACTCCACC GACATCACCG ATCCGCACCA GCGCATGGTC
GCCAGCCTGC GCATGATCGC CAAGATGCCG ACGCTTGCCG CGATGGCCTA CAAATACCAT
ATCGGCCAAC CCTTCGTTTA TCCGAAGAAC GACCTCGACT ATGCCTCGAA CTTCCTGCGC
ATGTGCTTTG CTGTGCCCTG CGAGGAATAT GTGGTCAATC CGGTGCTTTC CCGCGCCATG
GACCGCATCT TCATCCTGCA TGCCGATCAT GAGCAGAACG CCTCGACCTC GACCGTCCGT
CTCGCCGGTT CATCGGGTGC CAACCCGTTC GCCTGCATCG CCGCCGGCAT TGCTTGCCTC
TGGGGGCCCG CTCACGGCGG TGCTAACGAA GCAGCCCTCA ACATGCTGAC GGAAATCGGC
ACGGTCGACC GCATTCCGGA ATATGTCGCC CGCGCCAAGG ACAAGAATGA TCCGTTCCGC
CTGATGGGCT TCGGTCACCG GGTCTACAAG AACTACGATC CGCGCGCCAA GATCATGCAG
AAGACGACGC ATGAAGTGCT CGGCGAACTC GGCATCAAGG ACGATCCGTT GCTCGAAGTG
GCGATGGAGC TGGAGCGCAT CGCGCTCACC GACGAATATT TCATCGAGAA GAAGCTCTAT
CCGAACATCG ACTTCTATTC CGGCATCACG CTGAAGGCGC TGGGCTTCCC CACGACCATG
TTCACCGTGC TCTTCGCGCT CGCCCGCACC GTCGGCTGGA TCGCGCAGTG GAACGAGATG
ATCGAGGATC CGGAACAGCG CATCGGCCGT CCGCGCCAGC TTTATGTCGG CGAACCGAAG
CGCGACTACA TTCCGGTTTC GAAGCGCTGA
 
Protein sequence
MTDQSATIKI GDKSVDLAVK SGTIGPSVID IGALYKNTAS FTYDPGFTST ASCESKITYI 
DGDEGVLLHR GYPIEQLAEH GDFLEVCYLL LYGELPTTVQ KKDFDYRVTH HTMVHEQMSR
FFTGFRRDAH PMAVMCGCVG ALSAFYHDST DITDPHQRMV ASLRMIAKMP TLAAMAYKYH
IGQPFVYPKN DLDYASNFLR MCFAVPCEEY VVNPVLSRAM DRIFILHADH EQNASTSTVR
LAGSSGANPF ACIAAGIACL WGPAHGGANE AALNMLTEIG TVDRIPEYVA RAKDKNDPFR
LMGFGHRVYK NYDPRAKIMQ KTTHEVLGEL GIKDDPLLEV AMELERIALT DEYFIEKKLY
PNIDFYSGIT LKALGFPTTM FTVLFALART VGWIAQWNEM IEDPEQRIGR PRQLYVGEPK
RDYIPVSKR