Gene Rleg_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1744 
Symbol 
ID8012808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1738351 
End bp1738929 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content64% 
IMG OID644824334 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_002975569 
Protein GI241204473 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000196433 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.915282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA GGATTTCATC GAACGAATAC TCCGACCTCG ACGAGCTATC AGGAGAGGCG 
GTCGATCTTG TTGAAATCAC CGGCGTCGTC AAGTGGTTCG ACGTCGCCAA GGGTTTCGGC
TTCATCGTGC CCGACAACGG CATGCAGGAT GTTCTCCTGC ACGTGACCTG CCTGCGCCGC
GACGGTTACC AGACGATCCT CGAGGGAACG CGCATCGTCG CCCTCATCCA GCGCCGCGAG
CGCGGCTATC AGGCTTTCAA GATCCTCTCG ATGGACCAGT CGACCGCGGT TCATCCCTCG
CAGCTGCCGC CGGTGCGCAC CCATGTGCAG GTCACCGCGA CGAGCGGGCT CGAGCGTGCG
CTGGTCAAGT GGTTCAACCG CACCAAGGGC TTCGGCTTCC TGACGCGTGG CGAGGGCACC
GAAGATATCT TCGTGCACAT GGAAACGCTC CGCCGCTTCG GCCTGACGGA ACTGCGCCCC
GGTCAGGTGG TGCTCGTCCG CTTCGGCGAC GGCGAAAAGG GCCTGATGGC CGCAGAGATC
CATCCCGACG TTCCGAGCCC GGCAAGCCGG TCGCACTGA
 
Protein sequence
MADRISSNEY SDLDELSGEA VDLVEITGVV KWFDVAKGFG FIVPDNGMQD VLLHVTCLRR 
DGYQTILEGT RIVALIQRRE RGYQAFKILS MDQSTAVHPS QLPPVRTHVQ VTATSGLERA
LVKWFNRTKG FGFLTRGEGT EDIFVHMETL RRFGLTELRP GQVVLVRFGD GEKGLMAAEI
HPDVPSPASR SH