Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1744 |
Symbol | |
ID | 8012808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1738351 |
End bp | 1738929 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644824334 |
Product | cold-shock DNA-binding domain protein |
Protein accession | YP_002975569 |
Protein GI | 241204473 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000196433 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.915282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA GGATTTCATC GAACGAATAC TCCGACCTCG ACGAGCTATC AGGAGAGGCG GTCGATCTTG TTGAAATCAC CGGCGTCGTC AAGTGGTTCG ACGTCGCCAA GGGTTTCGGC TTCATCGTGC CCGACAACGG CATGCAGGAT GTTCTCCTGC ACGTGACCTG CCTGCGCCGC GACGGTTACC AGACGATCCT CGAGGGAACG CGCATCGTCG CCCTCATCCA GCGCCGCGAG CGCGGCTATC AGGCTTTCAA GATCCTCTCG ATGGACCAGT CGACCGCGGT TCATCCCTCG CAGCTGCCGC CGGTGCGCAC CCATGTGCAG GTCACCGCGA CGAGCGGGCT CGAGCGTGCG CTGGTCAAGT GGTTCAACCG CACCAAGGGC TTCGGCTTCC TGACGCGTGG CGAGGGCACC GAAGATATCT TCGTGCACAT GGAAACGCTC CGCCGCTTCG GCCTGACGGA ACTGCGCCCC GGTCAGGTGG TGCTCGTCCG CTTCGGCGAC GGCGAAAAGG GCCTGATGGC CGCAGAGATC CATCCCGACG TTCCGAGCCC GGCAAGCCGG TCGCACTGA
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Protein sequence | MADRISSNEY SDLDELSGEA VDLVEITGVV KWFDVAKGFG FIVPDNGMQD VLLHVTCLRR DGYQTILEGT RIVALIQRRE RGYQAFKILS MDQSTAVHPS QLPPVRTHVQ VTATSGLERA LVKWFNRTKG FGFLTRGEGT EDIFVHMETL RRFGLTELRP GQVVLVRFGD GEKGLMAAEI HPDVPSPASR SH
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