Gene Rleg_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1623 
Symbol 
ID8012695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1612048 
End bp1613496 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content62% 
IMG OID644824209 
ProductDeoxyribodipyrimidine photo-lyase 
Protein accessionYP_002975450 
Protein GI241204354 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.528738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAAAGG ACGCGGCAAA ACCGGTCATC CTCTGGTTTC GCAAGGACCT GCGCCTTGAC 
GACAATCAGG CACTCACCGC CGCCCATCGC TCCGGGCGGC CGATCATCCC GCTCTATATT
AGAGAACCGG CGGCAGCAGG CACCGGTCCG CTGGGTGCTG CACAGGCCTG GTGGCTGCAT
CATTCACTGG AAGCGCTCAA CAGGTCGCTG CAAAAGCTGA ATGGACGGTT GGTGTTGGCA
AGCGGCGAGG CGCTCGAAGT GCTTTGCGCC TTTATCAAGG AAAGCGCTGC CGAAGCCGTC
TTCTGGAACC GGCGCTACGA TCCAGCCGGA ATCTCCATCG ACGCCCGTAT CAAGCACGAA
CTGGAAAAGC AGGCGATCGA GGCAAGAAGC TTTGGCGGCC AGCTGCTGCA CGAACCTTCC
CGGCTGATGA CCGGCAACGG CACGCCCTAT CGCGTCTACA CGCCATTCTG GCGCGCGCTG
GAGGGCGGCG GCGAACCGGA GCCGCCGCTG GACGCGCCGG CAAAACTGCG GCTTGCGTCG
CAACCGAAAT CAGAAGTGCT GGGGAGCTGG AAGCTGCTCC CGACGAAGCC GGACTGGGCA
GGCGATTTCG TTGATCTCTG GACACCCGGC GAAGAGGGTG CCCAGCAGAG ACTCCACGTC
TTCGTTGAAG ACGCGCTCGA GGGCTACAAG GAAAACCGAG ACTATCCAGC GAGGCCGGCG
ACGTCGATGC TGTCGCCGCA TCTGGCGCTG GGCGAGATAT CCCCTGCCCG CATCTGGGAT
GCCACACGCG GCCTGTCGCA ACGCGTGCCG GCGGCTGACA TCGTGCATTT TCGCGAGGAG
ATCGCCTGGC GCGAATTTTC CTATCACCTG CTTTTCCATT TCCCGCGTCT TGCCTCTGCC
AACTGGAACG ATCGTTTCGA CGGCTTCGAA TGGCGCAACA ACAGCGGAGA TTTCGAGGCG
TGGCGCCGCG GCATGACCGG CTATCCGATC GTCGATGCCG GCATGCGCCA GCTCTGGCGC
CATGGCTGGA TGCACAATCG CGTGCGCATG ATCGTCGCCT CCTTCCTCAT CAAGGATCTG
ATGATCGACT GGCGCCGGGG CGAGGCCTGG TTTCGGGATA CGCTCGTTGA TGCCGATCCC
GCCAACAATG CCGCAAGCTG GCAATGGGTG GCGGGCTCGG GAGCCGATGC CTCGCCATTT
TTCCGCATCT TCAATCCGGT GCTGCAGGGC GAAAAGTTCG ATCCCGACGG CGACTATGTC
AGGACCTACG TGCCGGAGCT TCGAGAACTC GGGCCAAAAT ACATCCACCG GCCGTTCGAG
GCGCCGAAGA GCATGCTCGA CGAGGCCGGC ATCACGCTTG GCCAAACCTA TCCGAAACCG
ATCGTCGATC ACGCGAGCGC CCGCAACCGG GCGCTTGCCG CCTACAAAGC AATAAGGGAT
GCCGCATGA
 
Protein sequence
MAKDAAKPVI LWFRKDLRLD DNQALTAAHR SGRPIIPLYI REPAAAGTGP LGAAQAWWLH 
HSLEALNRSL QKLNGRLVLA SGEALEVLCA FIKESAAEAV FWNRRYDPAG ISIDARIKHE
LEKQAIEARS FGGQLLHEPS RLMTGNGTPY RVYTPFWRAL EGGGEPEPPL DAPAKLRLAS
QPKSEVLGSW KLLPTKPDWA GDFVDLWTPG EEGAQQRLHV FVEDALEGYK ENRDYPARPA
TSMLSPHLAL GEISPARIWD ATRGLSQRVP AADIVHFREE IAWREFSYHL LFHFPRLASA
NWNDRFDGFE WRNNSGDFEA WRRGMTGYPI VDAGMRQLWR HGWMHNRVRM IVASFLIKDL
MIDWRRGEAW FRDTLVDADP ANNAASWQWV AGSGADASPF FRIFNPVLQG EKFDPDGDYV
RTYVPELREL GPKYIHRPFE APKSMLDEAG ITLGQTYPKP IVDHASARNR ALAAYKAIRD
AA