Gene Rleg_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1534 
Symbol 
ID8015572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1517108 
End bp1518613 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content59% 
IMG OID644824121 
Productcyclic nucleotide-regulated small mechanosensitive ion channel 
Protein accessionYP_002975363 
Protein GI241204267 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.231252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.283254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGCT TTTCTAGTAT CGTTGGAGAC CCGATCGCAC AGTTCGCAGC ACTGGTTGCC 
CTTACGATGA TAGCGCGATT GCTGGCACGC GGGCACTCTG CAACACGCTT CGCTGCCAAT
GTGATGTTCT TCGCCCTCCT CACTGTCCTT CTCGTCGCCA ACAAAGTCGC GCCTTGGAAC
GGCGACGCGA CGGCAGAAGA TCTCACCCAC CGAATATTCA TCGGACTTGC GAAGGCCACT
TGGTGGATCG GCGGTGCGAT GACGTTGGTG AGTGCGGTCC GCCTCTTCCT GATTTTCGAG
CAGAAACCAA GAGAGGGTCG ACTGATCCAG GATCTGCTTG TCGGCGTGAT TTACTCGGGC
GCAGCGCTTG CCGTCATCGC CTTCGTGTTC AGTCTACCGG TCGGGACACT TATCGCCACC
TCGGGTGTTT TTGCCATCGT TCTCGGCCTT GCTCTCCAGA GCACTTTGAA CGACGTCTTC
TCGGGCATCG CCCTCAACCT TGGCCGGCCA TACACCGTTG GCGACTGGAT AGCCCTTGAA
GACGGCGCGC AGGGCCGCGT GGTCGAGACA AACTGGCGCG CTACGCACCT GCTCAGCAAC
ACGAACGATT TGATCATCGT CCCGAACAGC GCGCTTGCCA AGGCCCGCCT CACGAACATG
ACCGGGACGG ACGAGACCCA TGGCACCACG ATCACCATTC GCATCCTCCC GACTCGTCCG
CCAGCCGTGG TCGAAGAGAC CATGAGGACC GCACTGTTGA GCGCCAACTG CACACTGAAG
TCTCCTCCTC CGTCAGTTTC CGTCATCGGT CTCGATGCGT CGGCGATCGA AGTCGAACTG
GCGTTCAAAG TGTCGAGTCT CTCGCGGACG TCGGTCGCCA AGAACGAAAT ATATGATCTA
GTGTTCAGAC ATGCGAAGGC CGCGGGCCTG CAACTGGGAG CTCCTTATGG CGCGCAGGCG
GACGGCATCC AAAGCTCCGA GGGCGTCAAG CATCCCGGAA CGCCTTGGAG ACTGCTGAGC
TCGATCGCCC TGTTCTCTAC GCTTACGGAA GACGAGATGG AAAGTCTTGC CGCCAGCATG
AAGCGTCTCA CTTTTAAAAA GGACATGGTG ATCGCACCGC AGGACGCCTC GATGACGTCA
TTGATGATCG TGCGTAGCGG CGTCGTCGTG GTGGAGAAGC AAACGGAAGA GAGCTGCGAG
GAACTCACGC GTCTTGCGCC GGGCGACTTG TTCGGGGAGC GAGGAGTTCT GATGGGAGCG
CCCGAGACCG CCAGAATGAG GGCGCTCACA TTCGTGGTGG TCTACGAGAT ATCAAAGGAT
CATCTGGCGG GCGTGATGCA CGATCGGCCG TCGCTCGTCG AAGAACTCGG CGAACTACTC
GCTAAGAGAA TGCAGTCGGA AGAGCATCTG GGCGCCATCA ACGACAAGGC GGCGGGTAGT
CGTCCGACTT CGTTGGCGGC ACGCATCCGC CACCTGTTCG AGGTGCCGCA CATACCCAGA
AAATGA
 
Protein sequence
MVGFSSIVGD PIAQFAALVA LTMIARLLAR GHSATRFAAN VMFFALLTVL LVANKVAPWN 
GDATAEDLTH RIFIGLAKAT WWIGGAMTLV SAVRLFLIFE QKPREGRLIQ DLLVGVIYSG
AALAVIAFVF SLPVGTLIAT SGVFAIVLGL ALQSTLNDVF SGIALNLGRP YTVGDWIALE
DGAQGRVVET NWRATHLLSN TNDLIIVPNS ALAKARLTNM TGTDETHGTT ITIRILPTRP
PAVVEETMRT ALLSANCTLK SPPPSVSVIG LDASAIEVEL AFKVSSLSRT SVAKNEIYDL
VFRHAKAAGL QLGAPYGAQA DGIQSSEGVK HPGTPWRLLS SIALFSTLTE DEMESLAASM
KRLTFKKDMV IAPQDASMTS LMIVRSGVVV VEKQTEESCE ELTRLAPGDL FGERGVLMGA
PETARMRALT FVVVYEISKD HLAGVMHDRP SLVEELGELL AKRMQSEEHL GAINDKAAGS
RPTSLAARIR HLFEVPHIPR K