Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1534 |
Symbol | |
ID | 8015572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1517108 |
End bp | 1518613 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644824121 |
Product | cyclic nucleotide-regulated small mechanosensitive ion channel |
Protein accession | YP_002975363 |
Protein GI | 241204267 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.231252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.283254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGGCT TTTCTAGTAT CGTTGGAGAC CCGATCGCAC AGTTCGCAGC ACTGGTTGCC CTTACGATGA TAGCGCGATT GCTGGCACGC GGGCACTCTG CAACACGCTT CGCTGCCAAT GTGATGTTCT TCGCCCTCCT CACTGTCCTT CTCGTCGCCA ACAAAGTCGC GCCTTGGAAC GGCGACGCGA CGGCAGAAGA TCTCACCCAC CGAATATTCA TCGGACTTGC GAAGGCCACT TGGTGGATCG GCGGTGCGAT GACGTTGGTG AGTGCGGTCC GCCTCTTCCT GATTTTCGAG CAGAAACCAA GAGAGGGTCG ACTGATCCAG GATCTGCTTG TCGGCGTGAT TTACTCGGGC GCAGCGCTTG CCGTCATCGC CTTCGTGTTC AGTCTACCGG TCGGGACACT TATCGCCACC TCGGGTGTTT TTGCCATCGT TCTCGGCCTT GCTCTCCAGA GCACTTTGAA CGACGTCTTC TCGGGCATCG CCCTCAACCT TGGCCGGCCA TACACCGTTG GCGACTGGAT AGCCCTTGAA GACGGCGCGC AGGGCCGCGT GGTCGAGACA AACTGGCGCG CTACGCACCT GCTCAGCAAC ACGAACGATT TGATCATCGT CCCGAACAGC GCGCTTGCCA AGGCCCGCCT CACGAACATG ACCGGGACGG ACGAGACCCA TGGCACCACG ATCACCATTC GCATCCTCCC GACTCGTCCG CCAGCCGTGG TCGAAGAGAC CATGAGGACC GCACTGTTGA GCGCCAACTG CACACTGAAG TCTCCTCCTC CGTCAGTTTC CGTCATCGGT CTCGATGCGT CGGCGATCGA AGTCGAACTG GCGTTCAAAG TGTCGAGTCT CTCGCGGACG TCGGTCGCCA AGAACGAAAT ATATGATCTA GTGTTCAGAC ATGCGAAGGC CGCGGGCCTG CAACTGGGAG CTCCTTATGG CGCGCAGGCG GACGGCATCC AAAGCTCCGA GGGCGTCAAG CATCCCGGAA CGCCTTGGAG ACTGCTGAGC TCGATCGCCC TGTTCTCTAC GCTTACGGAA GACGAGATGG AAAGTCTTGC CGCCAGCATG AAGCGTCTCA CTTTTAAAAA GGACATGGTG ATCGCACCGC AGGACGCCTC GATGACGTCA TTGATGATCG TGCGTAGCGG CGTCGTCGTG GTGGAGAAGC AAACGGAAGA GAGCTGCGAG GAACTCACGC GTCTTGCGCC GGGCGACTTG TTCGGGGAGC GAGGAGTTCT GATGGGAGCG CCCGAGACCG CCAGAATGAG GGCGCTCACA TTCGTGGTGG TCTACGAGAT ATCAAAGGAT CATCTGGCGG GCGTGATGCA CGATCGGCCG TCGCTCGTCG AAGAACTCGG CGAACTACTC GCTAAGAGAA TGCAGTCGGA AGAGCATCTG GGCGCCATCA ACGACAAGGC GGCGGGTAGT CGTCCGACTT CGTTGGCGGC ACGCATCCGC CACCTGTTCG AGGTGCCGCA CATACCCAGA AAATGA
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Protein sequence | MVGFSSIVGD PIAQFAALVA LTMIARLLAR GHSATRFAAN VMFFALLTVL LVANKVAPWN GDATAEDLTH RIFIGLAKAT WWIGGAMTLV SAVRLFLIFE QKPREGRLIQ DLLVGVIYSG AALAVIAFVF SLPVGTLIAT SGVFAIVLGL ALQSTLNDVF SGIALNLGRP YTVGDWIALE DGAQGRVVET NWRATHLLSN TNDLIIVPNS ALAKARLTNM TGTDETHGTT ITIRILPTRP PAVVEETMRT ALLSANCTLK SPPPSVSVIG LDASAIEVEL AFKVSSLSRT SVAKNEIYDL VFRHAKAAGL QLGAPYGAQA DGIQSSEGVK HPGTPWRLLS SIALFSTLTE DEMESLAASM KRLTFKKDMV IAPQDASMTS LMIVRSGVVV VEKQTEESCE ELTRLAPGDL FGERGVLMGA PETARMRALT FVVVYEISKD HLAGVMHDRP SLVEELGELL AKRMQSEEHL GAINDKAAGS RPTSLAARIR HLFEVPHIPR K
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