Gene Rleg_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1510 
Symbol 
ID8012594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand+ 
Start bp1491658 
End bp1492767 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content58% 
IMG OID644824098 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_002975340 
Protein GI241204244 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00348363 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.317162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCCTT TCCCGCATGA CGCGCCGCCC TCGGAAATCA CCGCCGACAA TCCGGCCGGC 
ACCGACGGCT TCGAATTCGT CGAATTCGCC CATCCCGAGC CCGAAACGCT GCGCGAACTC 
TTCACACGCA TGGGCTATGT TGCGGTCGCC AAACACAAGA CGAAAGATAT CACCGTCTGG 
CGACAAGGCG ACATCAACTA TGTCCTGAAC GCCGAACCCG GCAGCCATGC CGCGCGCTTC 
GTCGCAAATC ACGGTCCCTG CGCCCCATCG ATGGCCTGGC GCGTCGTCGA CGCCCAACAC 
GCGTTCAAGC ATGCGGTGTC AAAAGGCGCT GTCCCCTATG AAGGGGACGA CAAGATGCTC 
GATGTTCCGG CGATTGTCGG CATCGGCGGC TCGCTGCTCT ATTTCGTCGA GACCTATGGT 
GCCAAGGGAT CGGCCTACGA GGCCGAGTTC GATTGGCTCG GCGAGCGCGA CCCGCATCCC 
CAAGGGATCG GCTTCTATTA TCTCGACCAT CTGACGCACA ACGTCTTTCG CGGCAACATG 
GACAAGTGGT GGGATTTTTA CCGCAACCTG TTCAATTTCA AGCAGATCCA CTTCTTCGAT 
ATCGATGGGC GCATCACCGG TCTGGTGAGC CGCGCCATCA CCTCGCCCTG CGGCAAAATC 
CGCATTCCGC TGAATGAATC GAAGGACGAC ACCAGCCAGA TCGAGGAATA TCTGAAGAAG 
TACAAGGGCG AGGGCATCCA GCATATCGCC GTTGGAACGG AGGATATTTA CGACGCCACC 
GACAGGCTGG CCGACAACGG CCTGCGTTTC ATGCCGGGTC CGCCGGAGAC CTATTACGAC 
ATGTCCTATG AACGCGTGAA CGGCCATAGT GAACCTGTCG AACGCATGAA GAAACACGGT 
ATCCTCATCG ATGGCGAAGG TGTGGTGAAT GGCGGCATGA CGAAAATCCT GCTGCAGATC 
TTCTCCAAGA CCGTCATCGG CCCGATCTTC TTCGAATTCA TCCAGCGCAA GGGCGACGAG 
GGTTTCGGCG AAGGCAATTT CCGGGCTCTC TTTGAGTCGA TCGAGGCCGA TCAGATCAAG 
CGTGGTGTCA TCGGGACTGC AGCGGAGTAA
 
Protein sequence
MGPFPHDAPP SEITADNPAG TDGFEFVEFA HPEPETLREL FTRMGYVAVA KHKTKDITVW 
RQGDINYVLN AEPGSHAARF VANHGPCAPS MAWRVVDAQH AFKHAVSKGA VPYEGDDKML 
DVPAIVGIGG SLLYFVETYG AKGSAYEAEF DWLGERDPHP QGIGFYYLDH LTHNVFRGNM 
DKWWDFYRNL FNFKQIHFFD IDGRITGLVS RAITSPCGKI RIPLNESKDD TSQIEEYLKK 
YKGEGIQHIA VGTEDIYDAT DRLADNGLRF MPGPPETYYD MSYERVNGHS EPVERMKKHG 
ILIDGEGVVN GGMTKILLQI FSKTVIGPIF FEFIQRKGDE GFGEGNFRAL FESIEADQIK 
RGVIGTAAE