| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1422 |
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| Symbol | rpoB |
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| ID | 8012515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1414979 |
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| End bp | 1419118 |
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| Gene Length | 4140 bp |
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| Protein Length | 1379 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644824011 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002975253 |
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| Protein GI | 241204157 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.381811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGA CCCTTTCGTT CAACGGTCGT AGGCGCGTAC GCAAGTTTTT TGGTAAGATC
CCCGAAGTCG CAGAAATGCC GAACCTCATC GAGGTTCAGA AGGCGTCCTA CGACCAGTTT
CTGATGGTTG AAGAGCCTAA GGGCGGCCGA CCCGACGAGG GTCTTCAGGC CGTTTTCAAG
TCGGTTTTCC CGATCACCGA TTTCTCCGGC GCATCCATGC TGGAATTCGT GTCCTACGAG
TTCGAACCGC CGAAGTTCGA CGTTGACGAA TGCCGTCAGC GCGACCTGAC CTATGCAGCG
CCGCTGAAGG TGACGCTGCG CCTCATCGTG TTCGATATTG ACGAGGATAC CGGCGCGAAG
TCGATCAAGG ACATCAAGGA ACAGTCCGTT TACATGGGCG ACATGCCGCT CATGACCAAC
AACGGCACGT TCATCGTCAA CGGCACCGAG CGCGTCATCG TCTCCCAGAT GCACCGTTCG
CCGGGCGTCT TCTTCGATCA CGACAAGGGC AAGAGCCATT CGTCCGGCAA GCTGCTCTTT
GCTGCGCGCG TCATCCCCTA TCGCGGTTCC TGGCTCGATA TCGAATTCGA CGCCAAGGAC
ATCGTCTATG CTCGTATCGA CCGCCGCCGC AAGATCCCTG TCACTTCGCT GCTGATGGCG
CTCGGCATGG ACGGCGAGGA AATTCTCGAC ACCTTCTACA CGAAGTCGCT CTACAAGCGC
GACGGCGAAG GCTGGCGCAT TCCCTTCAAG CCGGAAACGC TGAAGGGTGC CAAGGCGATC
ACCGAGATGG TCGACGCCGA TACCGGCGAA GTCGTCGTGG AAGCCGGCAA GAAGCTGACC
CCGCGCCTGC TGCGCACGCT GTCCGACAAG GGGCTGAAGG CCCTCAAGGC CGCCGACGAC
GATCTGTATG GCAACTACCT CGCCGGCGAC ATCGTCAACT ACTCGACGGG TGAAATCTAC
CTCGAGGCCG GCGACGAAAT CGACGAGAAG ACGCTTGGCA TCATCCTGGC GAACGGCTTC
GACGAGATCC CGGTTCTCGG CATCGACCAC ATCAATGTCG GCGCCTATAT CCGCAACACG
CTGACAGCCG ACAAGAACGA GAACCGTCAG GACGCTCTGT TCGACATCTA CCGCGTCATG
CGTCCGGGTG AACCGCCGAC CATGGAATCG GCTGAAGCCA TGTTCAACTC GCTGTTCTTC
GATGCGGAGC GTTACGACCT CTCCGCCGTC GGCCGCGTCA AGATGAATAT GCGCCTCGAC
CTGACCGTCG AAGACACCGT CCGCATCCTG CGCAAGGACG ACATCCTGGC CGTGGTCAGG
ATGTTGGTCG AACTGCGCGA CGGCAAGGGC GAGATCGACG ACATCGACAA TCTCGGCAAC
CGCCGCGTCC GTTCGGTGGG CGAGCTGATG GAAAACCAGT ACCGTCTCGG CCTGCTGCGC
ATGGAGCGCG CGATCAAGGA ACGCATGTCC TCGATCGAGA TCGACACGGT CATGCCGCAG
GATCTGATCA ACGCCAAGCC GGCCGCCGCT GCCGTGCGCG AATTCTTCGG TTCCTCGCAG
CTCTCGCAGT TCATGGACCA GGTCAATCCG CTCTCGGAAA TCACCCACAA GCGTCGTCTT
TCGGCTCTTG GCCCGGGCGG TCTGACCCGT GAGCGCGCCG GCTTCGAAGT CCGCGACGTG
CATCCGACCC ACTATGGCCG CATTTGCCCG ATCGAAACGC CGGAAGGCCC GAACATCGGT
CTCATCAACT CACTTGCGAC CTTTGCCCGC GTCAACAAGT ACGGCTTCAT CGAAAGCCCG
TACCGCCGCA TCGTCGACGG CAAGGTGACG AGCGACGTGC TCTACCTCTC CGCCATGGAA
GAGGCGAAGT ATTACGTCGC CCAGGCCAAC GCCGAGATGA ACGCTGACGG TTCCTTCGTC
GACGAATTCG TCGTCTGCCG TCATGCCGGC GAAGTCATGC TCGCCCCGCG CGACAGCATG
AACCTGATGG ACGTCTCGCC GAAGCAGGTC GTTTCGGTCG CAGCCGCGCT CATCCCGTTC
CTGGAAAACG ACGACGCCAA CCGCGCGCTC ATGGGCTCGA ACATGCAGCG TCAGGCAGTG
CCGCTGCTGC GTGCCGAAGC CCCGTTCGTC GGTACCGGCA TGGAGCCGGT CGTTGCCCGT
GACTCCGGTG CCGCCATCGG CGCCCGCCGC GGCGGCGTGG TCGACCAGGT CGACGCGACG
CGTATCGTTA TCCGCGCCAC GGAAGACCTC GAAGCCGGCA AATCCGGCGT CGATATCTAC
CGCCTGCAGA AGTTCCAGCG TTCGAACCAG AACACCTGCG TCAACCAGCG TCCGCTGGTC
ACCGTCGGTG ACGAGGTCAA CCGCGGCGAC ATCCTCGCCG ACGGCCCGTC GACCGATCTC
GGCGACCTGG CACTCGGCCG CAACGCGCTC GTCGCGTTCA TGCCCTGGAA CGGCTACAAC
TACGAAGACT CGATTCTGCT CTCCGAGCGT ATCGTTGCCG ACGACGTGTT CACCTCCATC
CACATCGAGG AATTCGAAGT GATGGCGCGC GACACCAAGC TTGGTCCTGA GGAAATCACC
CGCGATATTC CGAACGTTTC GGAAGAAGCA CTGAAGAACC TCGACGAAGC CGGCATCGTC
TATATCGGCG CCGAAGTTCA GCCGGGCGAT ATCCTCGTCG GCAAAATCAC ACCGAAGGGC
GAAAGCCCGA TGACGCCGGA AGAAAAGCTT CTGCGCGCCA TCTTCGGCGA AAAGGCCTCC
GACGTGCGCG ACACCTCCAT GCGCATGCCG CCCGGCACCT ACGGCACCAT CGTCGAAGTC
CGCGTCTTCA ACCGCCACGG CGTTGAAAAG GACGAGCGCG CGATGGCGAT CGAGCGCGAA
GAAATCGAGC GTCTGGCAAA GGACCGTGAC GACGAGCAGG CGATCCTCGA CCGTAACGTC
TACGGCCGTC TGATCGAGAT GCTGCGTGGC CAGGCCTCCA TCGCCGGCCC GAAGGGCTTC
AAGAAGGGAG CCGAGCTTTC GAACGCCGTC GTCTCCGAAT ATCCCCGCTC GCAGTGGTGG
ATGTTCGCGG TCGAAGACGA AAAGGTCCAG AGCGAGCTCG AAGCGCTTCG CGGCCAATAC
GACGAATCCA AGTCGCGCCT CGAACAGCGC TTCATGGACA AGGTCGAAAA GGTCCAGCGC
GGCGATGAAA TGCCTCCTGG CGTCATGAAG ATGGTCAAGG TCTTCGTCGC CGTAAAGCGC
AAGATCCAGC CCGGCGACAA GATGGCCGGC CGTCACGGGA ACAAGGGCGT CGTCTCGCGC
ATTGTGCCGG TGGAGGACAT GCCGTTCCTC GAAGACGGCA CGCATGTCGA TGTCGTTCTG
AACCCGCTCG GCGTGCCTTC GCGCATGAAC GTCGGCCAGA TCCTGGAAAC GCATCTGGGT
TGGGCTTGCG CCGGCATGGG TCGCCAGATC GGCGAACTGA TCGACGCATA CAAGGCCAAT
GGCAACATTG AGCCGCTGCG CAAGACCATC GGCGATGTCG TCGGAGACGG CCCCAAGGCC
GAACAGGTCC ATGAGTTCGA CGACGACTCT GTTCTGCGCC TCGCCGACCA GTGGAAGCGC
GGCGTTTCGA TTGCGACGCC TGTTTTCGAC GGCGCGAACG AAGCCGACGT CAACGACATG
CTGCGTCTGG CAGGTCTCAA GGATAGTGGT CAGTCGACGC TCTATGACGG CCGTACCGGT
GAGCAGTTCG ACCGTCAGGT GACGGTGGGC TACATCTACA TGCTGAAGCT CAACCACCTG
GTCGACGACA AGATCCATGC TCGTTCGATC GGTCCTTACT CGCTCGTGAC TCAGCAGCCG
CTGGGTGGCA AGGCGCAGTT CGGCGGCCAG CGCTTCGGCG AAATGGAAGT CTGGGCGCTC
GAAGCATACG GCGCGGCCTA CACGCTGCAG GAAATGCTGA CGGTGAAGTC GGACGACGTC
GCCGGCCGCA CCAAGGTCTA CGAAGCCATC GTCCGAGGAG ACGACACGTT CGAAGCCGGT
ATTCCGGAAA GCTTCAACGT TCTCGTCAAG GAAATGCGCT CACTGGGCCT CAGCGTCGAG
CTCGAGAACA CCAAGCTTGA CGAGGCGCAG GCAGCTCAGC TGCCCGACGC GGCCGAGTAA
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| Protein sequence | MAQTLSFNGR RRVRKFFGKI PEVAEMPNLI EVQKASYDQF LMVEEPKGGR PDEGLQAVFK
SVFPITDFSG ASMLEFVSYE FEPPKFDVDE CRQRDLTYAA PLKVTLRLIV FDIDEDTGAK
SIKDIKEQSV YMGDMPLMTN NGTFIVNGTE RVIVSQMHRS PGVFFDHDKG KSHSSGKLLF
AARVIPYRGS WLDIEFDAKD IVYARIDRRR KIPVTSLLMA LGMDGEEILD TFYTKSLYKR
DGEGWRIPFK PETLKGAKAI TEMVDADTGE VVVEAGKKLT PRLLRTLSDK GLKALKAADD
DLYGNYLAGD IVNYSTGEIY LEAGDEIDEK TLGIILANGF DEIPVLGIDH INVGAYIRNT
LTADKNENRQ DALFDIYRVM RPGEPPTMES AEAMFNSLFF DAERYDLSAV GRVKMNMRLD
LTVEDTVRIL RKDDILAVVR MLVELRDGKG EIDDIDNLGN RRVRSVGELM ENQYRLGLLR
MERAIKERMS SIEIDTVMPQ DLINAKPAAA AVREFFGSSQ LSQFMDQVNP LSEITHKRRL
SALGPGGLTR ERAGFEVRDV HPTHYGRICP IETPEGPNIG LINSLATFAR VNKYGFIESP
YRRIVDGKVT SDVLYLSAME EAKYYVAQAN AEMNADGSFV DEFVVCRHAG EVMLAPRDSM
NLMDVSPKQV VSVAAALIPF LENDDANRAL MGSNMQRQAV PLLRAEAPFV GTGMEPVVAR
DSGAAIGARR GGVVDQVDAT RIVIRATEDL EAGKSGVDIY RLQKFQRSNQ NTCVNQRPLV
TVGDEVNRGD ILADGPSTDL GDLALGRNAL VAFMPWNGYN YEDSILLSER IVADDVFTSI
HIEEFEVMAR DTKLGPEEIT RDIPNVSEEA LKNLDEAGIV YIGAEVQPGD ILVGKITPKG
ESPMTPEEKL LRAIFGEKAS DVRDTSMRMP PGTYGTIVEV RVFNRHGVEK DERAMAIERE
EIERLAKDRD DEQAILDRNV YGRLIEMLRG QASIAGPKGF KKGAELSNAV VSEYPRSQWW
MFAVEDEKVQ SELEALRGQY DESKSRLEQR FMDKVEKVQR GDEMPPGVMK MVKVFVAVKR
KIQPGDKMAG RHGNKGVVSR IVPVEDMPFL EDGTHVDVVL NPLGVPSRMN VGQILETHLG
WACAGMGRQI GELIDAYKAN GNIEPLRKTI GDVVGDGPKA EQVHEFDDDS VLRLADQWKR
GVSIATPVFD GANEADVNDM LRLAGLKDSG QSTLYDGRTG EQFDRQVTVG YIYMLKLNHL
VDDKIHARSI GPYSLVTQQP LGGKAQFGGQ RFGEMEVWAL EAYGAAYTLQ EMLTVKSDDV
AGRTKVYEAI VRGDDTFEAG IPESFNVLVK EMRSLGLSVE LENTKLDEAQ AAQLPDAAE
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