Gene Rleg_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1306 
Symbol 
ID8012405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1285600 
End bp1286937 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content56% 
IMG OID644823888 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002975137 
Protein GI241204041 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAA CCGTGAAATC GATCAGCATA CTGCCGGCAT ACGGATTGAA AGCAGCTGTC 
GCGCTTGCTG GCGCGGCGCT TTTGAGTTTT GGCCTTTCGA CAGCCGCGCG CGCCGACGAC
CTGGCCGTGT GGGATGACCA AACCTATGAA GGTCAGAGTG CTGTTATAGA GCAGCTCAAC
AAGGAGTTTG AAGCTGCCCA TCCCGGCGTC ACGATCAAAC GCACCGCCCG CACCTTTGAT
GACATGAAGT TGACGCTGAA GCTTGCGGTT TCGGCAGGTG ATGGCCCTGT CATCACCAAA
GTCAACCAGG GTGCCGGTGA CATGGGGGCG ATGGTCAAGG AGGGATTGCT TCTGCCGGTC
GACGACGACA TCAAAAAATA TGGCTGGGAT AAACTCCAGT CGGATTCCGT GCTTGCTCGA
GACCGCTGGG AGGATGGAAA ATTTGGGGTC GGTAAGACCT ACGGCATATC AGGTCTCGCC
GAGATCGTTG GCCTCTACTA CAATAAAAAA ATCCTCGCCG ATGCGGGAGT AGCGCTGCCG
CAAACCTTCG AGGAGCTGTT GGCCGGTCTC GACAAGCTGA AGGAAAAGGG CGTTCCGCCC
TTCATGATGG GCTCTGCAAA GCAACATCTG GCCCTGCACA TGATCGGCGC CATCGACCAA
GCGCATATCG ACGCCAGCAA TCGCGCAGAG CTTGACGATC TGATTTACGG ACGTGGCGGC
TCCTGGAACA CCAAGGGGAA CATCGAATCC GCCAAACTCG TGCAGCAATG GGCACAGGGC
GGTTATTTTT TCCTCGGTTT CGAAGGCATC TCGGGTGACG ACGCCGTCCA GCTTTTCATT
TCCGGGCAGG GCGCGTTCCT GATCTCCGGG ACCTGGTATT TCGGTGACAT GCAACACAAT
CCGGATATCG GCTTCATGGC GATTCCCGCT CCGAAGGGTG TTTCCAAACC CATGAGTGTC
GGGGGCGTGG ATCTTGCCTG GGCGATAACG AGCCTTGCCA AAAGCAAGCC GACACAGGAC
CTAGCCGGCG CATATATCGA TTATATGGTC TCAGAAAAGG CTGCTGAAAC CTGGGCCAAT
GCTGGCTATC TTCCGGCTAC TTCGCTCGCG GCTGACGCAA AGCCAAAGCT CACGCCGCTC
CTCACTTCCG GCATCGAAAT GTGGAAGACA CTCAACGCAA ACGACGCTCT CGGCCATTAC
CCCGATTGGT CGAGCCCAAC GATGCTGAAG ACAATAGACG ACAACACGCC GCTTCTTCTG
TCCGGCAATA TCACGCCCGA AGCCTTTGTC GATGCTATGG ACAAGGATTA TCAGGCGTAC
CTGAAGGACA AGAAATAA
 
Protein sequence
MTRTVKSISI LPAYGLKAAV ALAGAALLSF GLSTAARADD LAVWDDQTYE GQSAVIEQLN 
KEFEAAHPGV TIKRTARTFD DMKLTLKLAV SAGDGPVITK VNQGAGDMGA MVKEGLLLPV
DDDIKKYGWD KLQSDSVLAR DRWEDGKFGV GKTYGISGLA EIVGLYYNKK ILADAGVALP
QTFEELLAGL DKLKEKGVPP FMMGSAKQHL ALHMIGAIDQ AHIDASNRAE LDDLIYGRGG
SWNTKGNIES AKLVQQWAQG GYFFLGFEGI SGDDAVQLFI SGQGAFLISG TWYFGDMQHN
PDIGFMAIPA PKGVSKPMSV GGVDLAWAIT SLAKSKPTQD LAGAYIDYMV SEKAAETWAN
AGYLPATSLA ADAKPKLTPL LTSGIEMWKT LNANDALGHY PDWSSPTMLK TIDDNTPLLL
SGNITPEAFV DAMDKDYQAY LKDKK