Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1304 |
Symbol | |
ID | 8012403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1283076 |
End bp | 1284257 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644823886 |
Product | ROK family protein |
Protein accession | YP_002975135 |
Protein GI | 241204039 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.445462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATGA CATCTTCTGT CGCACAGACT CCGATCGCAC GAAAAATTTC AACCAATGCC GTCATCCGAA CCGTGTTCGC GAACGGGTCG ATCTCCCGCG CCGATATTGC CAAGCTAACC GGCTTATCAA AGCAGACGAT TTCCGATGTC GTGCGCGACC TTGAGGATGA CGGATGGCTG AAACCAGTCG GGCAGACTGA TGGTCGTCCG GGCCGGAATG CGATCACCTA TGAAATCAAT GCCAGGGCGG GACTGGCGGT CTCTATCGAT CTCGGGAGCA CCAAGATTGC TGCGGCTATT TGCGATCTAT TGGGGAACGT GGTTGCTGAA ACCAAAGTAC CCACCGACCC GCGCGGCGGA GTGCATCTCG TCAATCAGTT CAGCGATCTT ATCGTGGAAC TCGCGTTTGC GGCCGGGACG ACTGCCGACA AACTCCGTCT CGTCGTTCTA GGCAGTCCTG GTGTGCTCGA TCCGGCCACC GGGCATATCA ACGTAGCGCC AAGCATCCCC GGCATCGATG CCATAAATCT GCGGCAAGTC TTCAGCGACA GAATGGGGAT ACCGGTGATC GTTGAAAATG ACGTCAACCT GGCCGCGCAA GGGGAGAGAT GGCGGGGACA CGGTATCGAA ACCAGCAATT TTGCTTTCGT TGCTCTCGGA ACGGGCGTCG GCATGGGCAT CATCGCCAAC GGAACGCTAT TGCGCGGCGC GCGTGGGGCA GCCGGCGAAA TCGCCTATCT TCCGATCGGC GGAGATGCTT TTGATCCTGG CGGATTTACG CTTGGAACCT TTGAGAGTGC GGTCGGCAGC GTCGCGATGT TGCGCCGCTA CGTCGGTTTC GGCGGGCGTA ACGCCTCCAC TGTGGCCGAT CTCTTCGCCG CGTTTAATGC AGGAGAAACA AGTGCTGCGG CTGCCATCGA AGAGACGGCA CGGCTGGTCG CAGTCGCTAT TGCTGCAATC GGAGCGGCTC TCGATCCTGA ACTGGTGATC ACCGGCGGCA GCATCGGCGC AAGACTGGAA CTCGTCAATG CCATCCGCGG TTTCCTGCCG CGTTGTACGC CTTATCCGCC GCGCATCGAG ATCAGTCGCT TTGGGAACCG CGCCGCCCTG ATGGGAGGAA TGGGGATCGC GGTTGAGCGC ATGCATGACG ATCTATTTGG TGTAAAATTG AGGGAAGTTT GA
|
Protein sequence | MAMTSSVAQT PIARKISTNA VIRTVFANGS ISRADIAKLT GLSKQTISDV VRDLEDDGWL KPVGQTDGRP GRNAITYEIN ARAGLAVSID LGSTKIAAAI CDLLGNVVAE TKVPTDPRGG VHLVNQFSDL IVELAFAAGT TADKLRLVVL GSPGVLDPAT GHINVAPSIP GIDAINLRQV FSDRMGIPVI VENDVNLAAQ GERWRGHGIE TSNFAFVALG TGVGMGIIAN GTLLRGARGA AGEIAYLPIG GDAFDPGGFT LGTFESAVGS VAMLRRYVGF GGRNASTVAD LFAAFNAGET SAAAAIEETA RLVAVAIAAI GAALDPELVI TGGSIGARLE LVNAIRGFLP RCTPYPPRIE ISRFGNRAAL MGGMGIAVER MHDDLFGVKL REV
|
| |