Gene Rleg_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1197 
SymbolrpsF 
ID8015536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1172959 
End bp1173426 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content61% 
IMG OID644823781 
Product30S ribosomal protein S6 
Protein accessionYP_002975031 
Protein GI241203935 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.358566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0253087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTT ATGAACATGT ATTCCTTGCC CGGCAGGATA TTTCCGCTCA GCAGGTCGAT 
GCCCTCGTAG AACAGTACAA GGGTGTGATC GAAGCGAATG GCGGTAAGGT CGGGCGTATC
GAGAACTGGG GCCTCAAGTC CCTCACCTAC CGCATCAAGA AGAACCGCAA GGCGCACTAC
GCCCTGATGG ACATCGATGC ACCGGCTGCT GCCGTCCAGG AAATGGAACG TCAGATGCGC
ATCAGCGAAG ACGTTCTTCG CTACATGACG ATCGCCGTCG AGAAGCATGA AGAAGGTCCG
TCTGCCATGA TGCAGAAGCG CGACCGTGAC GACCGTCCGC GCGAAGGCGG CCGTGGCCCG
CGTGAAGGCG GCTTCGGTGA TCGTGACCGC GGCCCGCGTC CGCCGCGTGA AGGTGGCTTC
GGCGACCGTG ACGACCGTCC GCGCCGTCCG CGCGAAGACC GTGTATAA
 
Protein sequence
MALYEHVFLA RQDISAQQVD ALVEQYKGVI EANGGKVGRI ENWGLKSLTY RIKKNRKAHY 
ALMDIDAPAA AVQEMERQMR ISEDVLRYMT IAVEKHEEGP SAMMQKRDRD DRPREGGRGP
REGGFGDRDR GPRPPREGGF GDRDDRPRRP REDRV