Gene Rleg_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0424 
Symbol 
ID8011626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp441004 
End bp441894 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content62% 
IMG OID644823019 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002974273 
Protein GI241203177 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.271529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0400541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG TCACCGTCAA AACCGGCCAG CCATCCGCTC TTGCGGAGTT CTGGCATTAT 
TTCTCCCGCA ACAAGGGCGC CGTCATCGGC CTCGTGGTTT TCACCATCAT CCTGGTCGTC
GCAGTCCTCG CGCCGCTCTT TGCGCCACAT GAACCGAACG AGCAGAACCG CGCGGTACTG
CTCGCAGTGC CGTTCTGGAT GGAGGGTGGC AGCGCCTCCT TCCCGCTCGG AACGGATGCC
GTCGGCCGCG ATATCCTTTC GCGCCTGATC TATGGCGCGC GGTTTTCGCT GTTCATCGGC
GTCGTCGTCG TCACGCTTTC GGTCATTTCA GGCGTCCTGA TCGGCCTCGT CGCCGGATTC
TTCCGCGGCA AGGTCGATAC GGCGATCATG CGCCTGATGG ATATCATCCT GGCCTTCCCG
TCACTGTTGC TCGCTCTCGT TCTGGTGGCC GTGCTTGGGC CTGGTCTGAC CAATGCGATG
ATCGCGATTT CGCTGGTCAA CCAGCCGCAT TTCGTGCGGC TGACGCGCGC CTCGGTCATT
TCTGAGCGTG AGAAGGAATA TGTCATCGCC TCGCGTGTCG CCGGTGCCGG CACCTTCCGG
TTGATGTTCA AGACGATCCT GCCGAACTGT CTGGGCCCAC TGATCGTTCA GGCGACGCTC
GCCTTCTCGG CGGCGATTCT CGATGCCGCC GCCCTCGGCT TTCTCGGCAT GGGCGCCCAG
CCGCCGACGC CCGAATGGGG GACGATGCTG GCCGAATCCC GTGAGTTCAT CTCGCGCGCC
TGGTGGGTGG TGACATTCCC GGGTCTTGCC ATCCTCATCA CCGTTCTTGC CATCAACCTG
ATGGGCGACG GCCTGCGCGA TGCGCTCGAT CCCAAACTGA AGAGGTCGTG A
 
Protein sequence
MSTVTVKTGQ PSALAEFWHY FSRNKGAVIG LVVFTIILVV AVLAPLFAPH EPNEQNRAVL 
LAVPFWMEGG SASFPLGTDA VGRDILSRLI YGARFSLFIG VVVVTLSVIS GVLIGLVAGF
FRGKVDTAIM RLMDIILAFP SLLLALVLVA VLGPGLTNAM IAISLVNQPH FVRLTRASVI
SEREKEYVIA SRVAGAGTFR LMFKTILPNC LGPLIVQATL AFSAAILDAA ALGFLGMGAQ
PPTPEWGTML AESREFISRA WWVVTFPGLA ILITVLAINL MGDGLRDALD PKLKRS