| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0413 |
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| Symbol | |
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| ID | 8011615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 428804 |
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| End bp | 432634 |
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| Gene Length | 3831 bp |
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| Protein Length | 1276 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644823008 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002974263 |
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| Protein GI | 241203167 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0153135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00020462 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGCAG TCCAATATCC GTTCATCGAT ATCGCCGTGC ATGCACGGGT ACGGGAACGC
TTTTCACGCG GCGAGGCCAT GGTGCTGTTT TCGGCCGATC TCGCCCGTCT GCTCTGGGCG
AACGGTGCGG GTGCCGAGCT TTTCGGCCAT TCGGCGGTCT ATGATCTGCT CGATCAGGGG
GTCGACCGCG CCGACATCAC CTTCCGCCAG CTGGAAACCG CCGCGCGCCA GCTGACCGAT
ATCGGCGACA GCCGCAGCCT GATGATCCGC GTCGCCAAGG GCTTTCAGCG TGCGCAGGTG
CAGGCGGCTG CCGAACTGAT CCGGCTTTCT CAGGGCGAAC AGGCCATCCT GTTTTCAGTG
CCGGTCTCGG CAAAACCACT CGCGGCCGGC GCATCGGCGG CCCAGATGCT GCAGGGGCTC
GATGATCCCG ACACGCATAT GGCGGTGATC GGCGCCAATG GTGAGGTCAT CGCCGCTTCG
CCGGGCTTTG CCTCGCTCGG GATCTCCGAG CAGACGGCAA AGACCTTGAT CAACCTTGCC
GGCGCGCATC CCGACCGGCT GGTGAAGCGA CCTGTCGCCA CCGGCAGAGG CAATCTCCCG
GCCGCGGTCG GCAAGCTCAG CGACGATCCG GCGCTCAATC TGCTCTTTGC TGTCGAGACC
GCGGTCGGTC ATCTTGACCC GGTCGATGCG CCCGCGCTCG CCCCGGTCGA TGCGCCCGCG
CTCGATCCAG TCGATGCGCC CGCACAGGAA GAAAGCGCGC CGCCGATGGA GGTGCTTCAG
GACGAACCCG TCGCCGCTAC AGGCTTCACC GAAATCATCG ACGCGGTCTC GGGGATCGAA
GAGGTCGAGG AGACGCTCGA GGAGATCACC GGCGAAAACG AGCAGCCGGC TGAGATAGCT
GTGGCATCCG CAGACGAGGC GATTGACGGG ATGGATCCTG CCGAGGACGC GGAGCCGAAG
AGCGACGACG GCGTGACCGA TAGCAGCGCG GATGAGCCCG CCGCGGTCAT TGAGGACGAT
GTGACTTCCA TTGCGGAGAC GGCGGAACCG CCTGTTGAAG CCAGCGAAAC GCCTATCGAA
GACGCGCCGG AAGCAGTCCA CGAAGAGACC GCTATCGCAA CGCCTGTGGT CCCCGACGTG
CCCCCTGCCC CTCAGCTTGA GGCTGAGTCG GGCTTCGTTT TCAGGCCAAA TAGCCGCGCC
ACGCGCTTCG TTTGGAAGAT CGACGCCGAA GGCCGATTCA ACGAAGTCAG CCACGAATTT
GCCGCGGCCG TCGGTCCGCA TGCGTCCGAC ATCATCGGCT CTGCCTTCGG CGATGTCGCC
GCCCTCTTCA ATCTCGATCC TGACGGCAAG CTTTCCGAGG CGCTCGCCCG CCGTGACACA
TGGTCGGGCA AGACGATCCT CTGGCCGGTC GAAGGCACCA GCCTCGTTGT TCCGGTCGAT
CTGGCGGCGC TGCCGACCTA TACCCGCAAC CGCGACTTCG ATGGCTTCCG CGGCTTCGGC
GTCGTCCGGC TTTCCGACGC GCAGGAAGAT CCGCTGGCGC TTGGCCTGAC ACTCGGCCCT
GATGGTATCG GCCATGATGC AGCGAGCCTC GGCCCGCCCG CCGAGACCAT TGCCGAGGTG
GCGCACGAAG CGGAGACAGT GCTTGAAGAG CCCCTGATCG ATCCCTCCCC GACGCAGGAG
GTCGAGGATC AGGCGCTTAC GGCAAGCGAA CCACAGGCGG AGCCAGCGCC GGAAGAGATT
GCCACCGAGC AGGCGGCCGA GATACCTGCC CAAGAAAGTG CTGCCGAAAA AGCGGAAGGC
AGCGCCGATG CCGGCGACAT TTCCGCCGCC GAGCCGGTAG CGGAACTTCC GCAAGAGCCG
CCGGCGCTTC GGATTTCGGA AACGCCTAAT CGCCGTTTCT CCGACAAGAT CGTTCAGCTC
CACAACACCG GTGCCGGACT GACGGCCGCC GAACAGGCCA ATTTCCGCGA GATCGCCAAG
CGCCTCGAAG CCTTCGGCGC CAACAAGGAC GAGCCCGCCG CCCCGGCGCC GATGGAACCC
AACGCCACGG AAACGGCCGC CTTCAACGAG GCCTCCGGAC CCGAAGCGTT CGGGGCCGAA
ACACCCACCG CCGACCAGGC GGACATACCG TCGCTCGAGG AGATCGCGCC GCAGGAGGCG
ATCTTCGAGA ATGCCGTTGA GGCGGAGCGC GAAGACGACG GCGCCACCGA AGAGCCGGCT
GTCATAGTCG AGGACGAGGC GACGGAAGGG CTGGAGGAGA CGGCCAGCCA GATCGAGGTT
CTCACAAGCT TCATCCCGCC GCGCATCAAG ATGACGGACG GGCTTTCGGT GGGCACGGTC
GACCAACTGC CTGTTGCCGT GCTCATCCAT ATCGGCGATG CGCTGATCCA CGCCAATCCG
GAATTCATGC GGCTGACGGG CTACGGTTCG CTCGACGCAT TGCGCGAGGT AGGCGGCATC
GAAGGTCTGC TGCAGCGCCG CGAACTCGAG GAGAAGGCCG CGGGCTCCGG CACCATGATG
CTCGTCAAGG CCGATGATAC GCTGGCGCCG GTGACCGCGC GGCTGCAATC GGTGCGCTGG
GAAGACGCCA ACGCCCTGAT GCTGGCGCTG ATGCCGGTGG AAGGCAAGGA AGATGGCCGC
GGCGACGCAA ACCGTTTCGA CGGTCGGTCC GAAGACCGCC CCGAGCGGAT GGTCGAGAAG
GTCGCTAAAC TCCAGGTCGA AGTGGAGGAA TTGCGCTCGA TCCTGGAAAC GGCGACCGAC
GGCGTCGTCG TCATTGGCAC CGAGGGCGAC ATCCGCTCGA TGAACCGGTC GGCCAGCGCG
CTTTTCAATT ACGACGAACA GGAGACGCGC GGCAAACCCT TCGTCATGCT GTTTGCCCAT
GAGAGCCAGA AGGCAGTCAT CGACTATCTG AACGGCCTCT CCGGCCATGG CGTGGCAAGC
GTGTTGAACG ACGGGCGCGA AGTGATCGGC CGCGAGGCCG CCGGTGGCTT CGTGCCGCTG
TTCATGACGA TGGGCCAGCT CACCTCCTCC AACGGCTATT GCGCCGTCAT CCGCGATATC
ACCCAGTGGA AGCGCACCGA GGACGAGCTG CGCAACGCCA AGGGCGCTGC CGAAACCGCC
AACGCCCACA AGACCGATTT CCTCGCCCGC GTCAGCCATG AGATCCGCAC GCCGCTCAAC
GCCATCATCG GCTTTTCCGA TATGATGGCC GGCGAGCGCT TCGGGCCGAT CGGCCATCCG
CGTTATATCG AATATGCCAA CGACATCGGC CGCTCCGGCC GGCACGTCCT CGATATCGTT
AACGACCTGC TCGACATCTC GAAGATCGAG GCGGGCGAGA TGGATCTCGA TTTTGCCGCC
GTCGGCCTCA ACGAGGCGGT TTCCGAAGCC GTGGCTCTGG TGCAGCCGCA GGCGAACGGC
CAGCGCGTCA TCATCCGCAC GGCGCTGTCG CAGGCAGTAC CTGAGGTCGT AGCGGATCTG
CGCTCGATCA AGCAGATCGC GCTGAACATC CTGTCGAACG CCATCCGCTT CACCCCGTCA
GGCGGGCAGA TCGTCGTTTC GACGTCCTAT GAGGCGAATG GCAGCGTTGT CCTCAGGGTC
CGCGATACCG GCATCGGCAT GACGCGCAGC GAACTCGACC AGGCGATGAA GCCGTTCCGG
CAGGTCTCCT CGACCCAATC GCGTCATCGC GGCGACGGCA CCGGGCTCGG CCTGCCGCTG
ACCAAGGCGA TGGTCGATGC CAACCGGGCG ACTTTCACGA TCAATTCGGC GCCGAACGAG
GGCACGCTCG TCGAGATCAC CTTCCCGTCG CAACGCGTGC TGGCCGGTTG A
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| Protein sequence | MPAVQYPFID IAVHARVRER FSRGEAMVLF SADLARLLWA NGAGAELFGH SAVYDLLDQG
VDRADITFRQ LETAARQLTD IGDSRSLMIR VAKGFQRAQV QAAAELIRLS QGEQAILFSV
PVSAKPLAAG ASAAQMLQGL DDPDTHMAVI GANGEVIAAS PGFASLGISE QTAKTLINLA
GAHPDRLVKR PVATGRGNLP AAVGKLSDDP ALNLLFAVET AVGHLDPVDA PALAPVDAPA
LDPVDAPAQE ESAPPMEVLQ DEPVAATGFT EIIDAVSGIE EVEETLEEIT GENEQPAEIA
VASADEAIDG MDPAEDAEPK SDDGVTDSSA DEPAAVIEDD VTSIAETAEP PVEASETPIE
DAPEAVHEET AIATPVVPDV PPAPQLEAES GFVFRPNSRA TRFVWKIDAE GRFNEVSHEF
AAAVGPHASD IIGSAFGDVA ALFNLDPDGK LSEALARRDT WSGKTILWPV EGTSLVVPVD
LAALPTYTRN RDFDGFRGFG VVRLSDAQED PLALGLTLGP DGIGHDAASL GPPAETIAEV
AHEAETVLEE PLIDPSPTQE VEDQALTASE PQAEPAPEEI ATEQAAEIPA QESAAEKAEG
SADAGDISAA EPVAELPQEP PALRISETPN RRFSDKIVQL HNTGAGLTAA EQANFREIAK
RLEAFGANKD EPAAPAPMEP NATETAAFNE ASGPEAFGAE TPTADQADIP SLEEIAPQEA
IFENAVEAER EDDGATEEPA VIVEDEATEG LEETASQIEV LTSFIPPRIK MTDGLSVGTV
DQLPVAVLIH IGDALIHANP EFMRLTGYGS LDALREVGGI EGLLQRRELE EKAAGSGTMM
LVKADDTLAP VTARLQSVRW EDANALMLAL MPVEGKEDGR GDANRFDGRS EDRPERMVEK
VAKLQVEVEE LRSILETATD GVVVIGTEGD IRSMNRSASA LFNYDEQETR GKPFVMLFAH
ESQKAVIDYL NGLSGHGVAS VLNDGREVIG REAAGGFVPL FMTMGQLTSS NGYCAVIRDI
TQWKRTEDEL RNAKGAAETA NAHKTDFLAR VSHEIRTPLN AIIGFSDMMA GERFGPIGHP
RYIEYANDIG RSGRHVLDIV NDLLDISKIE AGEMDLDFAA VGLNEAVSEA VALVQPQANG
QRVIIRTALS QAVPEVVADL RSIKQIALNI LSNAIRFTPS GGQIVVSTSY EANGSVVLRV
RDTGIGMTRS ELDQAMKPFR QVSSTQSRHR GDGTGLGLPL TKAMVDANRA TFTINSAPNE
GTLVEITFPS QRVLAG
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