Gene Rleg_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0146 
Symbol 
ID8011380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp141530 
End bp143983 
Gene Length2454 bp 
Protein Length817 aa 
Translation table11 
GC content61% 
IMG OID644822737 
Productglycoside hydrolase family 2 sugar binding 
Protein accessionYP_002973996 
Protein GI241202900 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3250] Beta-galactosidase/beta-glucuronidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA AGACTGCGCT CAATTCCGGC TGGACGCTCT CCTGTAACGA TACAGTAAGG 
CTCGGCCTGC CGGCTGCAAT ACCCGCGACG GTGCCGGGCT GCGTGCATCT CGACCTTCTC
GCCAACCGGC TGATCCCCGA TCCCTATATC GACGTCAACG AGATCACCAA TGACTGGATC
GGCAAGACCG ACTGGACCTA TCGCTGCAGT TTCGAGGCGA TGCCTGACGA TGCCAGGGTG
CAGGAACTGG TCTTCGACGG GCTCGATACG GTCGCGGTGA TATCCCTCAA CGGCGAAGAG
ATCGGCTGCA CCTTCAACAT GCACCGTACC TATCGTTTCG ATGTTTCCCG GCTTCTGAAG
GCTGGCCAGA ACGAACTCAC GGTCACCTTC CGCTCCGCCT ACGCCTATGG AGCGGAGATG
GAAAAACATT ACGGCTACCG TCCCAACAAC TACCCGGGAC CGGGCAATCT GATGCGCAAG
ATGGCCTGTA ATTTCGGCTG GGACTGGGGG CCGACGCTGG TGACGGCAGG CCTCTGGAAG
CCGGTCCGGC TGGAAAGTTG GGATCGGGCG CGGCTTGCCG AAACACGGGT ATCGGCAATA
CTTTCCGGCG GCGACGGCCT GGTGAAGGTC CATGCCCGGC TGGCGCGGCA TGGAGATAAG
ACGCCGTTGA GGCTCGTTGC CGAAATCGGC GGCGTGAGCA AGACGGTGGC GATTGCGCCT
GATGAAGACG CGGTTTCCTT CGAGCTTGCC CTCCCCTCGC CGCAGCTCTG GTGGCCGCAC
CATCTCGGCG CGCAGCCGCT CTATCCAATG ACGCTGAGGC TGTTCGACGA GGCCAGCGAC
GATCTGCTCG ACAGCTATCA GCGTGAACTC GGTTTCCGCT CGCTGCGGCT CGATACCGCA
GCCGACGACC ATGGCTCGGC CTTTACCTTC ATCATCAACG ACGTGCCGCT CTTCATCTGC
GGGGCAAACT GGATTCCGGA CGATTGTTTT CCCCCGCGGT TGACGGCCGA GCGTTATGCC
GCGCGGATCG AGGAAGCAAA GGCCGCCAAT ATTCATATGC TGCGCGTCTG GGGCGGCGGC
ATCTTCGAGG CCGACGAGTT CTATGAGACC TGCGACCGCA AGGGCATGCT GGTCTGGCAG
GATTTCCTCT TTGCCTGCGC CGCCTATCCG GAGGAAGAGC CGCTCAGAAG CGAGGTCGAG
GCGGAGGTGC GCGACAATGT CGTGCGGCTG ATGCCGCATG CTTCGCTCGT CCTCTGGAAC
GGCAACAACG AGAACATCTG GGGCTTCGAC GAATGGGGCT GGCGGCCGAT CATCAAGGCG
GGCGAAAGCT GGGGGCTCGG CTACTATCTC GACCTGCTGC CGAAACTCTG CGCCGAACTC
GATCCGGACC GGCCCTATTA TCCCGGCAGT CCCTATTCCG GCTCGATGGA GATCGAACCC
AATGCCAACG GTCATGGCTG CAAACATATC TGGGATGTGT GGAACGATGT CGGCTACGAG
GTCTACCGCA ATTATATCCC GCGCTTCTGC TCCGAATTCG GCTGGCAGGC ACCGGCTGCC
TGGGCGACGA TCGAAGAAAG CGTGCATGAT GCGCCGCTGA CGCCGCAATC GAACGGCGTC
TTCCACCATC AGAAGGCAAC GGAGGGCAAT GACAAGCTGA TCCGCGGCCT GTCCGGCCAT
CTGCCGGAGC CCAAGACGAT GGATGACTGG CATTTCGCCA CCCAGCTCAA CCAGGCGCGT
GCCATCCGTT TCGGCGTCGA GCACATGCGC TCGCATCGCA ATATCTGCAA GGGTTCGGTG
GTCTGGCAGT TCAACGATTG CTGGCCGGTG ACCTCATGGG CAGCCCTCGA TTCGGCCGGA
CGCCGCAAGC CGCTCTGGTA TGCGCTGAAG ACAGCCTATG ATCCGCGCCT GCTGACGATC
CAGCCGCGCG GCGGCGGACT TGCGGCGGTG GCCGTCAATG AACGGACGCT GTTCTGGCGG
GCGAAGATCA GCGGCAAACG CCTGAAGCTC GACGGCACGG TGCTTGCCGA ATTCGAATTC
TGGCGCTTGC TCTGCGACCG TTTCGAAGCA AAGGAATTTC CGCTGCCCGA GGAGATCGTC
ACCCCCGACT TACCGAAGGA CGAGGTCATC GTCGTGCAGA TGCTGGACAG GCGAGCCTTC
CACTATTTCG TCGAGGATAT CGAGCTTGCC TTACCAGCAC CGCGGCTGAC GGTCGATGTC
ACCAGCATCG AGGGCGGGTA CGGGGTCAAG GTGACGGCGC AAAACTTCCT CAAGGATCTC
TGCCTGATGG CCGATCGACT GGATCCGGAT GCCGTTGTCG ATTCGATGCT GGTGACGCTG
CTGCCGGGCG AGAGCCATGT GTTTGTGGTC AAGACGACAA AGGCGATCGG GGCAGACGAC
ATTGTCTTCG GCACCGTTCT GCGGTCGGCC AACGATCTCA CCGCCGGGCG CTAG
 
Protein sequence
MIEKTALNSG WTLSCNDTVR LGLPAAIPAT VPGCVHLDLL ANRLIPDPYI DVNEITNDWI 
GKTDWTYRCS FEAMPDDARV QELVFDGLDT VAVISLNGEE IGCTFNMHRT YRFDVSRLLK
AGQNELTVTF RSAYAYGAEM EKHYGYRPNN YPGPGNLMRK MACNFGWDWG PTLVTAGLWK
PVRLESWDRA RLAETRVSAI LSGGDGLVKV HARLARHGDK TPLRLVAEIG GVSKTVAIAP
DEDAVSFELA LPSPQLWWPH HLGAQPLYPM TLRLFDEASD DLLDSYQREL GFRSLRLDTA
ADDHGSAFTF IINDVPLFIC GANWIPDDCF PPRLTAERYA ARIEEAKAAN IHMLRVWGGG
IFEADEFYET CDRKGMLVWQ DFLFACAAYP EEEPLRSEVE AEVRDNVVRL MPHASLVLWN
GNNENIWGFD EWGWRPIIKA GESWGLGYYL DLLPKLCAEL DPDRPYYPGS PYSGSMEIEP
NANGHGCKHI WDVWNDVGYE VYRNYIPRFC SEFGWQAPAA WATIEESVHD APLTPQSNGV
FHHQKATEGN DKLIRGLSGH LPEPKTMDDW HFATQLNQAR AIRFGVEHMR SHRNICKGSV
VWQFNDCWPV TSWAALDSAG RRKPLWYALK TAYDPRLLTI QPRGGGLAAV AVNERTLFWR
AKISGKRLKL DGTVLAEFEF WRLLCDRFEA KEFPLPEEIV TPDLPKDEVI VVQMLDRRAF
HYFVEDIELA LPAPRLTVDV TSIEGGYGVK VTAQNFLKDL CLMADRLDPD AVVDSMLVTL
LPGESHVFVV KTTKAIGADD IVFGTVLRSA NDLTAGR