Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0146 |
Symbol | |
ID | 8011380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 141530 |
End bp | 143983 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644822737 |
Product | glycoside hydrolase family 2 sugar binding |
Protein accession | YP_002973996 |
Protein GI | 241202900 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA AGACTGCGCT CAATTCCGGC TGGACGCTCT CCTGTAACGA TACAGTAAGG CTCGGCCTGC CGGCTGCAAT ACCCGCGACG GTGCCGGGCT GCGTGCATCT CGACCTTCTC GCCAACCGGC TGATCCCCGA TCCCTATATC GACGTCAACG AGATCACCAA TGACTGGATC GGCAAGACCG ACTGGACCTA TCGCTGCAGT TTCGAGGCGA TGCCTGACGA TGCCAGGGTG CAGGAACTGG TCTTCGACGG GCTCGATACG GTCGCGGTGA TATCCCTCAA CGGCGAAGAG ATCGGCTGCA CCTTCAACAT GCACCGTACC TATCGTTTCG ATGTTTCCCG GCTTCTGAAG GCTGGCCAGA ACGAACTCAC GGTCACCTTC CGCTCCGCCT ACGCCTATGG AGCGGAGATG GAAAAACATT ACGGCTACCG TCCCAACAAC TACCCGGGAC CGGGCAATCT GATGCGCAAG ATGGCCTGTA ATTTCGGCTG GGACTGGGGG CCGACGCTGG TGACGGCAGG CCTCTGGAAG CCGGTCCGGC TGGAAAGTTG GGATCGGGCG CGGCTTGCCG AAACACGGGT ATCGGCAATA CTTTCCGGCG GCGACGGCCT GGTGAAGGTC CATGCCCGGC TGGCGCGGCA TGGAGATAAG ACGCCGTTGA GGCTCGTTGC CGAAATCGGC GGCGTGAGCA AGACGGTGGC GATTGCGCCT GATGAAGACG CGGTTTCCTT CGAGCTTGCC CTCCCCTCGC CGCAGCTCTG GTGGCCGCAC CATCTCGGCG CGCAGCCGCT CTATCCAATG ACGCTGAGGC TGTTCGACGA GGCCAGCGAC GATCTGCTCG ACAGCTATCA GCGTGAACTC GGTTTCCGCT CGCTGCGGCT CGATACCGCA GCCGACGACC ATGGCTCGGC CTTTACCTTC ATCATCAACG ACGTGCCGCT CTTCATCTGC GGGGCAAACT GGATTCCGGA CGATTGTTTT CCCCCGCGGT TGACGGCCGA GCGTTATGCC GCGCGGATCG AGGAAGCAAA GGCCGCCAAT ATTCATATGC TGCGCGTCTG GGGCGGCGGC ATCTTCGAGG CCGACGAGTT CTATGAGACC TGCGACCGCA AGGGCATGCT GGTCTGGCAG GATTTCCTCT TTGCCTGCGC CGCCTATCCG GAGGAAGAGC CGCTCAGAAG CGAGGTCGAG GCGGAGGTGC GCGACAATGT CGTGCGGCTG ATGCCGCATG CTTCGCTCGT CCTCTGGAAC GGCAACAACG AGAACATCTG GGGCTTCGAC GAATGGGGCT GGCGGCCGAT CATCAAGGCG GGCGAAAGCT GGGGGCTCGG CTACTATCTC GACCTGCTGC CGAAACTCTG CGCCGAACTC GATCCGGACC GGCCCTATTA TCCCGGCAGT CCCTATTCCG GCTCGATGGA GATCGAACCC AATGCCAACG GTCATGGCTG CAAACATATC TGGGATGTGT GGAACGATGT CGGCTACGAG GTCTACCGCA ATTATATCCC GCGCTTCTGC TCCGAATTCG GCTGGCAGGC ACCGGCTGCC TGGGCGACGA TCGAAGAAAG CGTGCATGAT GCGCCGCTGA CGCCGCAATC GAACGGCGTC TTCCACCATC AGAAGGCAAC GGAGGGCAAT GACAAGCTGA TCCGCGGCCT GTCCGGCCAT CTGCCGGAGC CCAAGACGAT GGATGACTGG CATTTCGCCA CCCAGCTCAA CCAGGCGCGT GCCATCCGTT TCGGCGTCGA GCACATGCGC TCGCATCGCA ATATCTGCAA GGGTTCGGTG GTCTGGCAGT TCAACGATTG CTGGCCGGTG ACCTCATGGG CAGCCCTCGA TTCGGCCGGA CGCCGCAAGC CGCTCTGGTA TGCGCTGAAG ACAGCCTATG ATCCGCGCCT GCTGACGATC CAGCCGCGCG GCGGCGGACT TGCGGCGGTG GCCGTCAATG AACGGACGCT GTTCTGGCGG GCGAAGATCA GCGGCAAACG CCTGAAGCTC GACGGCACGG TGCTTGCCGA ATTCGAATTC TGGCGCTTGC TCTGCGACCG TTTCGAAGCA AAGGAATTTC CGCTGCCCGA GGAGATCGTC ACCCCCGACT TACCGAAGGA CGAGGTCATC GTCGTGCAGA TGCTGGACAG GCGAGCCTTC CACTATTTCG TCGAGGATAT CGAGCTTGCC TTACCAGCAC CGCGGCTGAC GGTCGATGTC ACCAGCATCG AGGGCGGGTA CGGGGTCAAG GTGACGGCGC AAAACTTCCT CAAGGATCTC TGCCTGATGG CCGATCGACT GGATCCGGAT GCCGTTGTCG ATTCGATGCT GGTGACGCTG CTGCCGGGCG AGAGCCATGT GTTTGTGGTC AAGACGACAA AGGCGATCGG GGCAGACGAC ATTGTCTTCG GCACCGTTCT GCGGTCGGCC AACGATCTCA CCGCCGGGCG CTAG
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Protein sequence | MIEKTALNSG WTLSCNDTVR LGLPAAIPAT VPGCVHLDLL ANRLIPDPYI DVNEITNDWI GKTDWTYRCS FEAMPDDARV QELVFDGLDT VAVISLNGEE IGCTFNMHRT YRFDVSRLLK AGQNELTVTF RSAYAYGAEM EKHYGYRPNN YPGPGNLMRK MACNFGWDWG PTLVTAGLWK PVRLESWDRA RLAETRVSAI LSGGDGLVKV HARLARHGDK TPLRLVAEIG GVSKTVAIAP DEDAVSFELA LPSPQLWWPH HLGAQPLYPM TLRLFDEASD DLLDSYQREL GFRSLRLDTA ADDHGSAFTF IINDVPLFIC GANWIPDDCF PPRLTAERYA ARIEEAKAAN IHMLRVWGGG IFEADEFYET CDRKGMLVWQ DFLFACAAYP EEEPLRSEVE AEVRDNVVRL MPHASLVLWN GNNENIWGFD EWGWRPIIKA GESWGLGYYL DLLPKLCAEL DPDRPYYPGS PYSGSMEIEP NANGHGCKHI WDVWNDVGYE VYRNYIPRFC SEFGWQAPAA WATIEESVHD APLTPQSNGV FHHQKATEGN DKLIRGLSGH LPEPKTMDDW HFATQLNQAR AIRFGVEHMR SHRNICKGSV VWQFNDCWPV TSWAALDSAG RRKPLWYALK TAYDPRLLTI QPRGGGLAAV AVNERTLFWR AKISGKRLKL DGTVLAEFEF WRLLCDRFEA KEFPLPEEIV TPDLPKDEVI VVQMLDRRAF HYFVEDIELA LPAPRLTVDV TSIEGGYGVK VTAQNFLKDL CLMADRLDPD AVVDSMLVTL LPGESHVFVV KTTKAIGADD IVFGTVLRSA NDLTAGR
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