Gene Rleg_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0095 
Symbol 
ID8015396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp88899 
End bp90692 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content61% 
IMG OID644822685 
Productputative inner membrane protein translocase component YidC 
Protein accessionYP_002973945 
Protein GI241202849 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain
[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.10916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA ACCGCAATTA CTTCATTGCG ATCGCTCTCT CGGTGCTGAT CGTCCTCGGC 
TGGCAATTTC TCTATATGAA TCCACGCATC GAGGCCCAGC GCAAGGTGCA GGAAGCCCAG
AAGGCGCAGC AGCAGACCGA GCAGGTGCAG CAGCCGGCAG CAGGCGGTCA GACGCCGGCC
CAGCCGAGCG GTGCGGCACC TACCAGCCAG GCGGCCGCAA CGGCGACGCT CGAGCAGGCG
CTGGCAAAGA GCCCGCGCGT CGTCATCGAC ACTGCTGCCC TCTCCGGCTC GATCAATCTT
GCCGGCGCCC GCCTCGACGA CCTGAAGCTC AAGGGCTACC ACGAGACCGT CGACGACTCG
AGCCCGATCA TCACGCTGTT CAGCCCGGCC GAAACCAAGG ACGGTTACTT CACCGAGCTC
GGCTATATCG GTAGTGACGC GACAGGCAGC GTTCCCGGTC CCTCGACGCT CTGGACGGCT
CCGGAGGGCG CCAAGCTCAC CGAAAAGACG CCGGTGACGC TTTCCTACAC CAATGACAAG
GGTCTGACCT TCACCCGCAC CATCTCCGTC GACGAACGCT ACATGTTCAC CGTCGCCGAC
AAGATCGAGA ATGCCGGCCA GGCTCCCGCC TCGCTCAATT CTTACGGCCG TGTCACGCGT
TACAACAAGC CGACGACGCC CTCGGTCTAC GTGCTGCATG AAGGCTTCAT CGGCGTCATC
GGCGACGACG GCCTCGTCGA AACCAAATAT ACCGCCGCCG AAAAGGAAGC CGTCAAGCCG
GCCAAATCCA CCGGTGGCTG GCTCGGCATC ACCGACAAAT ACTGGGCCGC GACGATCGTT
CCACCGCAGA GCGCTCCCTA TGAGGCAAGC TTCTCGCATT TTGCCGACGG TCAGCCGCGC
TATCAGGCCG ACTACAAGGA AGATGCCTTC ACCGTTGCGC CTGGCCAATC GATCGAGCTG
AAGAACCTCG TCTTCGCCGG CGCCAAGGAA GTGCCCGTCA TCGACGGTTA TGAGGCCAGC
TACTCGATCC CGAAGTTCGA CCGGCTGATC GACTGGGGCT GGTTTTATTT CATCACCAAG
CCGATGTTCA AGCTGATGGA CTTCTTCTTC CGCTACTTCG GCAATTTCGG CGTGGCGATC
CTGTGCACCA CCATCGTCGT CAAGCTCCTG TTCTTCCCGC TCGCCAGCAA GCAGTACGCT
TCGATGGCGA ACATGAAGCG CATGCAGCCG AAGATGGAGG AACTGAAGGC GAAATTCGCA
GACGACCGCA TGGGGCTGCA GCAAGCGACG ATGCAGCTCT ACAAGGAAGA GAAGATCAAT
CCGATCGCCG GCTGCTGGCC GGTGGCGCTG CAGATCCCGA TCTTCTTCTC GCTCTATAAG
GTGATCTACA TCACCATCGA GATGCGGCAT GCGCCGTTCT TCGGCTGGAT CAAGGACCTT
TCGGCGCCCG ATCCGACGAC GATCGTCAAT CTGTTCGGCC TGCTGCCCTT CGAGGCGCCG
ACCATTCTGC ATCTCGGCGT CTGGCCGCTG ATCATGGGCG TCACGATGTT CCTGCAGATG
CGCATGAACC CGACGCCGCC CGATCCGACG CAGGCGATGA TCTTCACTTG GATGCCGCTG
GTGTTCATGT TCATGCTGGC AAGCTTCCCG GCCGGCCTGG TCATCTACTG GGCCTGGAAC
AACACGCTCT CGGTGGCGCA GCAGTCGGTG ATCATGAAGC GCCACGGCGT CAAGGTCGAA
CTCTTCGACA ATCTGAAGGG TCTGTTCCGA CGAAAAACGG CACCGTCGAA ATGA
 
Protein sequence
MENNRNYFIA IALSVLIVLG WQFLYMNPRI EAQRKVQEAQ KAQQQTEQVQ QPAAGGQTPA 
QPSGAAPTSQ AAATATLEQA LAKSPRVVID TAALSGSINL AGARLDDLKL KGYHETVDDS
SPIITLFSPA ETKDGYFTEL GYIGSDATGS VPGPSTLWTA PEGAKLTEKT PVTLSYTNDK
GLTFTRTISV DERYMFTVAD KIENAGQAPA SLNSYGRVTR YNKPTTPSVY VLHEGFIGVI
GDDGLVETKY TAAEKEAVKP AKSTGGWLGI TDKYWAATIV PPQSAPYEAS FSHFADGQPR
YQADYKEDAF TVAPGQSIEL KNLVFAGAKE VPVIDGYEAS YSIPKFDRLI DWGWFYFITK
PMFKLMDFFF RYFGNFGVAI LCTTIVVKLL FFPLASKQYA SMANMKRMQP KMEELKAKFA
DDRMGLQQAT MQLYKEEKIN PIAGCWPVAL QIPIFFSLYK VIYITIEMRH APFFGWIKDL
SAPDPTTIVN LFGLLPFEAP TILHLGVWPL IMGVTMFLQM RMNPTPPDPT QAMIFTWMPL
VFMFMLASFP AGLVIYWAWN NTLSVAQQSV IMKRHGVKVE LFDNLKGLFR RKTAPSK