Gene Rleg_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0085 
Symbol 
ID8011327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp81209 
End bp82357 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content64% 
IMG OID644822675 
ProductFMN-dependent alpha-hydroxy acid dehydrogenase 
Protein accessionYP_002973935 
Protein GI241202839 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA CAGACTGCTA TAATTTTCAC GATTTCCGGC GCATGGCCAA ACGGCGTCTT 
CCCGGACCGA TATTCGACTA TATTGACGGC GGTGCCGACG ACGAGGTGAC GTACCGGCGC
AATACCGCGG CCTTCGAGGC CTGCGATCTG GTGCCCGACG TTTTGCGCGG TGTGGCCGAT
GTCGACATGT CGGTAACTGT CATGGGCCAG AAGCTCGCAA TGCCGGTCTA TTGCTCGCCG
ACGGCGTTGC AGCGGCTTTT TCACCACCAG GGGGAGCGGG CGGTCGCGGC GGCGGCGGCA
AAACATGGCA CGATGTTCGG CGTCTCCTCG CTCGGCACGA TCAGCCTGGA GGAAGCCAGA
CAGATCAGCA ACGGGCCGCA GGTCTATCAG TTCTATTTCC ACAAGGACCG TGGCCTCAAC
CGCGAGATGA TGGCGCGAGC GAAAAATGCC GGCGTGCAGG CGATGATGCT GACGGTCGAC
AGCATCACCG GCGGCAACCG CGAGCGCGAC AAGCGCACGG GCTTTGCCAT TCCCTTCAAG
CTCAATCTTG CCGGCATGAC CCAGTTCGCG ATCAAGCCTT CCTGGGCGAT CGACTGGCTG
ACGCATGAGC GCTTCCGGCT GCCGCAGCTC GAAAACCACG TCAAGATGGA TGGCGGCGCG
CTGTCGATCA GCCGATACTT CACCGAGATG CTGGACCCCT CGATGTCGTG GGACGACGTG
GCGGAGATGG TGCGCGAATG GGGCGGGCCA TTCTGCCTGA AGGGCATCAT GTCGGTCGAA
GACGCCAAGC GCGCGGCCGA GATCGGCTGC AGCGGCATCG TGCTTTCCAA TCATGGCGGG
CGCCAGCTCG ACGGCTCGCG CAGCGCTTTC GACCAGTTGG CCGAGATCGT CGACGCCGTG
GGCGACCGGG TCGACGTGAT GATGGATGGC GGCGTGCAGC GGGGAACGCA TGTTCTTAAA
GCGCTGTCGC TGGGGGCGAA GGCCGTCGGG CTCGGGCGCT ACTATCTCTT CCCGCTTGCC
GCGGCCGGAC AGCCCGGCGT CGAACGGGCG CTGGAGACGA TGCGCACCGA GATCGAGCGC
GGCATGAAGC TGATGGGCTG CACCTCGGTC AGCCAGCTCA GCCGGCGGAA TCTGCGCTTC
CGTTCCTGA
 
Protein sequence
MRLTDCYNFH DFRRMAKRRL PGPIFDYIDG GADDEVTYRR NTAAFEACDL VPDVLRGVAD 
VDMSVTVMGQ KLAMPVYCSP TALQRLFHHQ GERAVAAAAA KHGTMFGVSS LGTISLEEAR
QISNGPQVYQ FYFHKDRGLN REMMARAKNA GVQAMMLTVD SITGGNRERD KRTGFAIPFK
LNLAGMTQFA IKPSWAIDWL THERFRLPQL ENHVKMDGGA LSISRYFTEM LDPSMSWDDV
AEMVREWGGP FCLKGIMSVE DAKRAAEIGC SGIVLSNHGG RQLDGSRSAF DQLAEIVDAV
GDRVDVMMDG GVQRGTHVLK ALSLGAKAVG LGRYYLFPLA AAGQPGVERA LETMRTEIER
GMKLMGCTSV SQLSRRNLRF RS