Gene Rleg_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0062 
Symbol 
ID8011308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp60715 
End bp61329 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content60% 
IMG OID644822652 
ProductOstA family protein 
Protein accessionYP_002973912 
Protein GI241202816 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA TTGCCGGCGC ATTTGCCCTT ATTCTGACGG CCTCGGGCGC GGGCGCGCAG 
CAGGCGACGG CCACGATGCC GGGCATGAAG CTGTCCAACG ACCAGCCGAT CCAGATCGAA
AGCGACAAGC TGGAGATCCA CGACCAGGAA CACACCGCTC TCTTTACCGG CAACGTCAAG
GTCGTCCAAG GGGCGACGAC GATGCAGTCC GGCAAGATGA CCGTCTATTA CAAGGACAAG
GCGGCAAAGC CGGCCACTGA CGGGACGCAA CCGGCGGCCC AACCCGCAGC GCAGCCGCAG
CAGTCTGCCT CGCTTGCATC GGGGAGTGCC GATATCGACA AGATCCTGGT GACGGACAAG
GTCTTTTTGA CCTCGGGCAC GCAGACGGCG ACCGCCGATG ACGGCAATTT CGACATGGCC
TCGCAGACAT TCATCCTCAC CGCGGATGAG GGAAAAAAAG TTATTCTGTC GGACGGGCCG
AATGTTTTTA CCGGCTGCAA GCTGACGGTT CACATGCAGA CCGGCCAGGC GGAGCTTGAA
AGCTGCGGCG GGCGTGTCCA GATTCAGCTC GATCCGAAGT CGAAGCCGAA TACACCGCAG
CAGAAGCAGA ACTGA
 
Protein sequence
MAFIAGAFAL ILTASGAGAQ QATATMPGMK LSNDQPIQIE SDKLEIHDQE HTALFTGNVK 
VVQGATTMQS GKMTVYYKDK AAKPATDGTQ PAAQPAAQPQ QSASLASGSA DIDKILVTDK
VFLTSGTQTA TADDGNFDMA SQTFILTADE GKKVILSDGP NVFTGCKLTV HMQTGQAELE
SCGGRVQIQL DPKSKPNTPQ QKQN