| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0047 |
|---|
| Symbol | |
|---|
| ID | 8011294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 43656 |
|---|
| End bp | 46382 |
|---|
| Gene Length | 2727 bp |
|---|
| Protein Length | 908 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644822637 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_002973897 |
|---|
| Protein GI | 241202801 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.967716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCTC GAATAGACAC AGGGAATGAA GCCTTTTCGG CTGCCGAGCT CGCCACGGCG
GAAAGCCGTG CCTCGGCGAC GCCGATGATG GAGCAATTTA TCGAGATCAA GGCGAACAAT
CCGGGTTCGC TGCTGTTCTA TCGCATGGGC GATTTCTACG AGCTGTTCTT CGAGGATGCG
CTGGAAGCTT CACGCGCGCT CGGTATCACG CTGACGAAGC GCGGCCAGCA CATGGGCCAG
GATATCCCGA TGTGCGGGGT TCCGGTGCAT GCGGCCGACG ATTATCTGCA GAAGCTGATT
TCGCTCGGCT TCCGCGTCGC CGTCTGCGAG CAGATCGAAG ATCCGGCCGA AGCAAAAAAA
CGCGGCGCGA AATCCGTCGT CAAGCGTGAC GTCGTCCGCC TCGTCACTCC AGGCACGATC
ACCGAGGAAA AGCTGCTTTC GCCCTCGGAA TCCAACTATC TGATGGCGCT GACCCGCATT
CGCGCCAGCG GCGAGGCCTT GCTGGCGCTT GCCTGGATCG ATATTTCCAC CGGCGTCTTC
CGGCTTGCCG AGACCGAAGC CTCGCGCCTG CTTGCCGATA TCCTGCGCAT CGATCCGCGT
GAGCTCATCC TTCCCGACAC GATCTTCCAC GATCCCGAAC TCAAACCGGT CTTCGACGTG
CTCGGCCGGA CAGCCGTGCC GCAGCCTTCC GTGCTCTTCG ACAGCGCCAG CGCCGAAGGC
CGGATCGCGC GGTATTTCGG CGTCGCGACG CTCGACGGCT TCGGCACCTT CTCACGCGCC
GAGCTGGCAG CGGCCGCGGC CGCCGTCGCC TATGTCGAGA AGACGCAGAT TGCCGAGCGG
CCGCCGCTTG GAAAACCGGA ACGGGAAAGT GCAGCCTCGA CGCTGTTCAT CGATCCCGCC
ACCCGCGCCA ATCTGGAGCT TGCCCGCACG CTTTCCGGCG ATCGCAACGG TTCGCTGTTG
AAGGCAATCG ACCGCACCGT CACCGGCGGC GGCGCCAGGC TTCTTGCCGA ACGGCTGATG
TCGCCGCTGA CCGACCCGGC CCGCATCAAT GCGCGGCTCG ATTCGATCGG TTTCCTGATC
GACGAACCCC TGCTTTGCGG CAATCTGCGC GACACGCTGA AACATGTTCC CGACATGCCG
CGCGCTCTGT CGCGCCTGGC GCTCGACCGC GGCGGCCCGC GCGATCTCTG GGCGATCCGC
CAGGGCCTCG AAGCGGCGGG CGGAATTGCG GCGATGCTCG GCAAGGCGAT GCTGCCCGAA
GAACTCGGCC AGGCGCTATC CGGGCTGCAG GCCCTTCCCG CGGCAGTGGA AAAGCTGCTT
GCCGAAACGC TCGCCGACGA ATTGCCGCTG TTGAAACGCG ATGGCGGCTT CCTTCGCGAC
GGCGCCAGCG CCGAGCTCGA CGAGGTCCGG GCACTGCGCG ACCAGTCCCG TCGCGTCATC
GCCGGCCTGC AATTGCAATA TGCCGAGGAG ACCGGCATCC GGTCGCTGAA GATCAAGCAC
AACAACGTCC TCGGTTATTT CATCGAAGTC ACCGCCGGCA ATGCCTCGCC GATGACGGAG
ACGGCGGAGG CGAAGGCCCG CTTCATCCAC CGCCAGACGA TGGCGAACGC CATGCGCTTC
ACCACGACCG AACTTGCCGA TCTCGAAAGC CGCATCGCCA ATGCCGCCGA CCAGGCGCTG
ACGATCGAAC TCGAAGCCTT CGACAGGATG ACGGCGGCCG TCGTTGCGGA AGCCGAGGCG
ATCAAGTCGG GCGCCCGGGC GCTTGCCGTC ATCGACGTCG CCGCAGGCTT GGCGCTTCTC
GCCGAGGAGC AGGCCTATTG CCGCCCGCAG GTCGACGGCT CGAAGATGTT TGCCATCGAG
GGCGGGCGCC ATCCGGTCGT CGAGCAGGCG CTGCGGCGGC AAGCGGGCGG CCCCTTCGTC
GCCAATCATT GCGATCTGTC GCCGAGGACC GGCGACCGGG ACGGGGCGAT CTGGCTGCTG
ACCGGCCCGA ACATGGGCGG CAAGTCGACC TTCCTGCGCC AGAACGCGCT GATATCAATC
CTGGCGCAGA TGGGCTCCTT CGTGCCGGCG ACATCGGCCC ATATCGGCAT CGTCGACCGG
CTTTTCTCGC GCGTCGGCGC CTCCGACGAT CTGGCGCGTG GGCGCTCGAC CTTCATGGTC
GAGATGGTCG AAACGGCGGC GATCCTCAAC CAGGCGAGCG ACCGTTCCCT CGTCATCCTC
GACGAGATCG GCCGCGGCAC CGCCACGTTC GACGGTCTTT CGATCGCCTG GGCCGCCGTC
GAGCACCTGC ATGAGGCCAA TCGCTGCCGC GGCCTCTTCG CCACGCATTT CCACGAACTG
ACCGTGCTTT CGGAAAAGCT TGGCCGGCTG TCGAACGCGA CGATGCGCGT CAAAGAATGG
GACGGCGACG TCATCTTCCT GCACGAGGTC GGGCCGGGTG CGGCGGACCG CTCCTACGGC
ATCCAGGTCG CGCGCCTTGC CGGGCTTCCG GCCTCGGTCG TGGCGCGCGC CCGCGACGTG
CTCACCCGGC TGGAAGATGC CGATCGCAAG AACCCGGCGA GCCAGTTGAT CGACGACCTG
CCGCTCTTCC AGGTGGCGGT GCGCCGCGAG GAAACCGCCC GCGGGACCTC CAAGGTCGAG
GAGGCACTGA AGGCGATGAG CCTTGACGAC ATGACACCGC GCGAGGCAAT GGATGCGCTT
TACGACCTCA AGAAGAAGTT GAAATAG
|
|---|
| Protein sequence | MNARIDTGNE AFSAAELATA ESRASATPMM EQFIEIKANN PGSLLFYRMG DFYELFFEDA
LEASRALGIT LTKRGQHMGQ DIPMCGVPVH AADDYLQKLI SLGFRVAVCE QIEDPAEAKK
RGAKSVVKRD VVRLVTPGTI TEEKLLSPSE SNYLMALTRI RASGEALLAL AWIDISTGVF
RLAETEASRL LADILRIDPR ELILPDTIFH DPELKPVFDV LGRTAVPQPS VLFDSASAEG
RIARYFGVAT LDGFGTFSRA ELAAAAAAVA YVEKTQIAER PPLGKPERES AASTLFIDPA
TRANLELART LSGDRNGSLL KAIDRTVTGG GARLLAERLM SPLTDPARIN ARLDSIGFLI
DEPLLCGNLR DTLKHVPDMP RALSRLALDR GGPRDLWAIR QGLEAAGGIA AMLGKAMLPE
ELGQALSGLQ ALPAAVEKLL AETLADELPL LKRDGGFLRD GASAELDEVR ALRDQSRRVI
AGLQLQYAEE TGIRSLKIKH NNVLGYFIEV TAGNASPMTE TAEAKARFIH RQTMANAMRF
TTTELADLES RIANAADQAL TIELEAFDRM TAAVVAEAEA IKSGARALAV IDVAAGLALL
AEEQAYCRPQ VDGSKMFAIE GGRHPVVEQA LRRQAGGPFV ANHCDLSPRT GDRDGAIWLL
TGPNMGGKST FLRQNALISI LAQMGSFVPA TSAHIGIVDR LFSRVGASDD LARGRSTFMV
EMVETAAILN QASDRSLVIL DEIGRGTATF DGLSIAWAAV EHLHEANRCR GLFATHFHEL
TVLSEKLGRL SNATMRVKEW DGDVIFLHEV GPGAADRSYG IQVARLAGLP ASVVARARDV
LTRLEDADRK NPASQLIDDL PLFQVAVRRE ETARGTSKVE EALKAMSLDD MTPREAMDAL
YDLKKKLK
|
|---|
| |