Gene Rleg_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0031 
Symbol 
ID8011278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp28490 
End bp29911 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content62% 
IMG OID644822621 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_002973881 
Protein GI241202785 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[TIGR00089] RNA modification enzyme, MiaB family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.191379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG ATAGCGCCCT TCTCCAGGCC CCCGAGGCAA TTCCCAGCGA CAGCCTCCAC 
GACGGCAGCA ACAGCCGCAA GGTCTTCATC AAGACCTATG GCTGTCAGAT GAACGTCTAC
GATTCCATGC GCATGAGCGA TGCGCTCGCC CGCGACGGCT ACGAGCCGAC GGACGATATG
GAAGAGGCGG ACCTCGTTCT GCTCAACACC TGCCATATCC GCGAGAAGGC GGCCGAGAAG
GTCTATTCGG CGCTCGGACG GCTCCGCGAT ATGAAAAAGA AGAAGGCGGC GGACGGACGG
GAGATGATGA TCGGCGTTGC CGGCTGCGTC GCCCAGGCCG AAGGCGAGGA GATCCTGCGC
CGCGCACCCG CCGTCGACGT CGTCATCGGC CCGCAGACCT ACCACCGCCT GCCGGAAGCG
CTACGCCTGG CCAAACAGGG CCAGCGCGTC GTCGATACCG AATATGCGAT CGAGGACAAG
TTCGAGCATC TGCCGATCGC CGAGAGCCGA AGGATCCGCG CCCGCGGCGT CACCGCCTTC
CTGACGGTGC AGGAGGGCTG CGACAAATTC TGCACCTTCT GTGTCGTGCC CTATACACGC
GGCTCGGAAG TGTCGCGGCC GGTTTCGCAG ATCGTCGAGG AGGCCGAAAA GCTCGCCGAC
AGCGGGGTGC GCGAGATCAC CCTGCTCGGG CAGAACGTCA ACGCCTGGCA CGGCGCCGGG
CCGCAAGGTG AGGCATGGAG CCTCGGCGAC CTGCTCTACC GGCTGGCCGA GATCCCCGGC
CTTGCGCGGC TGCGTTATAC CACAAGCCAT CCGCGCGACA TGGACGACCG GCTGATCAAT
GCCCATCGCG ACCTGAGCGC ACTGATGCCC TATCTGCACC TGCCGGTGCA ATCGGGCTCG
GACCGCATCC TGAAAGCGAT GAACCGGCGC CATACGGCCG CCGAATATCT CACGCTGATC
GAGCGCATCC GCACGGTGCG GCCCGACATC GCGCTGTCGG GCGATTTCAT CACCGGCTTT
CCGGGGGAGA CAGATGAGGA TTTTAAGGAT ACATTGAGAC TTGTGGAGGA GGTCCGTTAT
GCACAGGCCT TCTCGTTCAA ATACTCGACG CGGCCGGGCA CGCCCGGCGC GGAGCTGAAG
GACCAGGTGC CGGAAGAGAT CAAGGCAGAA CGGCTGGAAC GCCTGCAAAT GCTTCTCCTG
AAGCAGCAGC AGGAATTTGC CGAATCCTGC ATCGGCAAAG AGATCGACCT GTTGCTCGAA
AAGCCCGGTC GCATGCCGGA ACAACTAATC GGACGTTCTC CCTGGCTTCA ATCCGTGAAT
GTTGATGCAA AAGCATCGCA AATCGGTGAC ATTATCAAAG TGCGAATCAC AGGAACCGGA
ACAAACAGCC TGTTTGCGGA ACGCGCAGAG GCTGCGGTTT AA
 
Protein sequence
MTQDSALLQA PEAIPSDSLH DGSNSRKVFI KTYGCQMNVY DSMRMSDALA RDGYEPTDDM 
EEADLVLLNT CHIREKAAEK VYSALGRLRD MKKKKAADGR EMMIGVAGCV AQAEGEEILR
RAPAVDVVIG PQTYHRLPEA LRLAKQGQRV VDTEYAIEDK FEHLPIAESR RIRARGVTAF
LTVQEGCDKF CTFCVVPYTR GSEVSRPVSQ IVEEAEKLAD SGVREITLLG QNVNAWHGAG
PQGEAWSLGD LLYRLAEIPG LARLRYTTSH PRDMDDRLIN AHRDLSALMP YLHLPVQSGS
DRILKAMNRR HTAAEYLTLI ERIRTVRPDI ALSGDFITGF PGETDEDFKD TLRLVEEVRY
AQAFSFKYST RPGTPGAELK DQVPEEIKAE RLERLQMLLL KQQQEFAESC IGKEIDLLLE
KPGRMPEQLI GRSPWLQSVN VDAKASQIGD IIKVRITGTG TNSLFAERAE AAV