Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0006 |
Symbol | rph |
ID | 8015386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 5172 |
End bp | 5891 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644822597 |
Product | ribonuclease PH |
Protein accession | YP_002973857 |
Protein GI | 241202761 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00173681 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGCCTT CAGGCAGAAA AATCGACCAG ATGCGCAAGG TCTCGTTCGA GCGCAATTTT TCCAAGCATG CGGAAGGCTC CTGCCTGGTG AAGTTCGGCG ACACGCATGT GCTCTGCACG GCGAGTCTCG AAGAAAAGAC GCCGCCATGG CTGCGCAATA CCGGCAAGGG CTGGGTCACG GCCGAATACG GCATGCTGCC GCGGGCAACC GGCGAACGCA TGAAGCGCGA GGCTGCCGCC GGCAAGCAGG GCGGCCGCAC CCAGGAAATC CAGCGGCTGA TCGGCCGGTC GCTGCGCGCC GTCGTCGACC TGCAGGCGCT CGGCGAACGG CAGATCACGC TGGATTGCGA CGTCATCCAG GCCGATGGCG GCACGCGGAC CGCCTCGATC ACCGGCGGCT GGATCGCGCT TTACGACTGC CTGAAATGGA TGGAAAGCCG CAACATGATC AAGGTCGAAC GGGTCCTGAA GGATCATGTC GCCGCCATCT CCTGCGGCAT CTTCGCCAGC CAGCCGGTGA TCGATCTCGA TTACATCGAA GACTCCTCGG CCGAGACCGA TGCGAACTTC GTCATGACGG GCACCGGCGG GATCGTCGAG ATCCAGGGCA CGGCCGAAGG CACGCCGTTC AGCGAGGGCG AATTCACCTC GCTGATGCAG CTTGCCAGAA ACGGCATCGG CGAACTCGTG GCACTGCAGA AGCAAGCCGT CGAAGGATGA
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Protein sequence | MRPSGRKIDQ MRKVSFERNF SKHAEGSCLV KFGDTHVLCT ASLEEKTPPW LRNTGKGWVT AEYGMLPRAT GERMKREAAA GKQGGRTQEI QRLIGRSLRA VVDLQALGER QITLDCDVIQ ADGGTRTASI TGGWIALYDC LKWMESRNMI KVERVLKDHV AAISCGIFAS QPVIDLDYIE DSSAETDANF VMTGTGGIVE IQGTAEGTPF SEGEFTSLMQ LARNGIGELV ALQKQAVEG
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