| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5355 |
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| Symbol | |
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| ID | 8007852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 244248 |
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| End bp | 247418 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644822563 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_002973823 |
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| Protein GI | 241114348 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCC GGCTGATTCT GGCGTCGATC CGCAACCGCT TCCTGATCCT GCTGGCGACG
CTGATGCTGA CTGCGTGGGG ATTGTGGGCC GTGCGTAGCA CGCCGCTCGA TGCCTTGCCC
GACCTGTCGG ACGTGCAAGT CATCATCCGC ACACCGTTCC CCGGCCAGGC GCCGCAGATC
GTGGAGAACC AGGTCACCTA TCCACTGACC ACCACCATGC TGTCGGTGCC GGGTGCCAAG
ACGGTGCGCG GCTACTCGTT CTTTGGTGAC TCGTTTGTCT ACGTGCTGTT CGAGGATGGG
ACCGACCTGT ATTGGGCACG CTCACGGGTG CTGGAATACC TGAACCAGGT GCAATCCCGC
CTGCCGGCCG CCGCCAAGCC CGCGCTGGGC CCGGACGCGA CCGGCGTGGG CTGGATTTAC
GAGTACGCGC TGGTGGACAA GACCGGCCAG CACGATCTCA GCCAGCTGCG CGCGCTGCAG
GACTGGTTCC TGCGCTTCGA ACTCAAGTCG CTGCCCAATG TGGCCGAGGT GGCGTCGCTC
GGCGGGATGG TGAAGCAGTT CCAGGTCGTC CTGATGCCGG ATCGATTACG CGCCTACAAC
CTGTCCCAAG CCAAGGTGCT GGCGGCGCTC AAGGGAGCCA ACCAGGAGAC TGGCGGCTCG
GTGCTGGAGT TGGGCGAGGC GGAATACATG GTCCGCGCCA GCGGCTACCT GAAGACGCTC
GACGACTTCC GGCAGATTCC ACTGACGACG AACGACGCAG GCATCGCCGT TCGCCTGGGC
GATGTCGCCA CCCTCCAGCT CGGGCCGGAG ATGCGGCGTG GCATTGCCGA TCTCAACGGC
CAGGGTGAGG TCGCTGGCGG CGTCATCGTG ATGCGCTCCG GCAAGAACGC ACTGGAAACC
ATCGAAGCGG TCAAGGCTAA GCTCGCCACG CTGCAGAAGA GCCTGCCAGC CGGTGTCGAG
ATCGTGCCGA CCTACGACCG TTCCGCGCTG ATCAACCGCG CGGTGGAGAA CCTGACGCAC
AAGCTGATCG AGGAATTCAT CGTCGTCGCA TTGGTGTGTC TGGTGTTCCT GTTCCATCTG
CGCTCGGCGC TAGTGGCCAT CGTCTCGCTG CCGCTGGGCG TGCTGGCGGC CTTCCTGGTG
ATGCGCTACC AGGGCGTCAA TGCCAACATC ATGTCGTTAG GCGGCATCGC CATCGCCGTC
GGTGCCATGG TCGACGCCGC CGTGGTCATG ATCGAGAACG CGCACAAGCA CCTGGAACGC
TGGCATGAGG AAAATCCGAA CCGCGAGCTC GAAGGCCACG AGCGCTGGAG TGTGATCGGC
GAATCGGCAG CCGAGGTCGG GCCGGCGCTG TTCTTCTCAC TGCTGATCAT CACGCTGTCA
TTCATTCCGG TGTTCACGCT GGAGGCGCAG GAAGGCCGGC TGTTCTCGCC GCTGGCATTT
ACCAAGACCT ACTCGATGGC AGCAGCGGCT GGTCTGTCGG TCACGCTCGT GCCGGTCCTG
ATGGGTTACA TGATCCGGGG ACGGATTCCC ACGGAGCAGT CCAACCCGCT CAGCCGCTGG
CTGATCCGCC TCTACCAGCC GATGCTGGCC AAGGTGCTCG CCTACCCCAA AGCCACCGTC
GGGATCGCCG CCGTCCTGCT GATCGCAACC GCCTGGCCGG TGATGCGGAT CGGAGGCGAA
TTCATGCCGC CGCTGGATGA AGGCGACCTG CTGTACATGC CATCGGCGCT GCCGGGGCTC
TCCGCCGGCA AGGCGGCCCA GCTATTGCAG CAAACCGACC GCCTCATCAA GACCGTCCCT
GAGGTCGCCA GTGTGTTCGG CAAGGCAGGC CGCGCCGACA CCGCCACCGA TCCGGCCCCC
ATCGAGATGT TCGAGACCAC CATCCAGTTC AAGCCGCGCG AGCAGTGGCG GCCCGGCATG
ACCACCGACA AGCTGGTGGA GGAACTTGAC CGCGTGGTCA AGGTACCGGG CCTGTCCAAC
ATCTGGGTGC CGCCGATCCG CAACCGCATC GACATGCTCG CCACCGGCAT CAAGAGTCCG
GTCGGCATCA AGGTGGCGGG CACGGACTTG AAGGAAATCG ACCGGCTGAC CACTCGGATC
GAGGAGGCCG TCAAGACCGT ACCCGGAGTC ACGTCCGCGC TGGCCGAACG CCTGTCCGGC
GGGCGCTACA TTGACGTCGA TATCGATCGG ATGGCCGCGG GGCGATACGG CCTCAATATC
GAGGACGTGC AAAGCATCGT GTCATCAGCC GTGGGGGGAG ACAACGTGGG TGAAGTCGTG
GATGGTCTGG CCCGGTTCCC CATCAACGTC CGTTACCCAC GGGACTACCG CGACTCGGTC
GAGCAGTTGC GGAGCCTGCC GATCGTCACC GACCGCGGCC AGCAGATCAC GCTGGCCGAC
GTGGCCCGTA TCCAGGTGGT GCAAGGCCCG CCGATGTTGC GCAGCGAGAA CGCCCGGCTG
TCGGGCTGGG TGTACGTGGA CATCCGTGGG CGCGATTTGC GTTCCGCAGT GAAAGACATG
CAAGCGGCGG TCGCCAAAGC GGTGCCGATG CCGGCGGGCT ATGCGCTGAG CTGGTCGGGC
CAGTTCGAGT ACCTGGAGCG CGCCAGCGCC AAACTGAAGG TCGTCGTGCC GTTCACTTTG
CTGATCATCT TCGTGCTGCT GTACCTGGTG TTCGGCCGGA TCGACGAGGC GCTGCTCATC
ATGGGCACGC TGCCGCTCGC GCTGATCGGC GGTTTCTGGC TGCTCTATCT GCTGGGCTAC
AACTTGTCGG TGGCCGGGGT CGTCGGCTTC ATCGCACTGG CCGGCGTGGC GGCCGAGTTC
GGCGTGATCA TGCTGCTCTA CCTCAAGCAG GCGTGGACGG AGCGGCAGGA GGCGGGCCAG
AACACGATAC CAGCGCTGCT GGAAGCCATC CAGGAAGGCG CCGTGCTACG GGTCCGCCCG
AAGGCCATGA CGGTCGCCGT CATCCTGGCC GGCCTGATCC CGATCATGTG GGCGCACGGC
ACCGGGTCCG AGATCATGCA GCGCATTGCC GCCCCGATGG TCGGCGGCAT GGTCACTGCG
CCCTTACTGT CCCTGTTCGT CGTCCCAGCC GTGTATCTGC TGATCCGTCG GCGGCAGACG
AAATCATCAC CACTTCCCAC CCACCCCTCA CATCAAGAGG AATCACCATG A
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| Protein sequence | MIARLILASI RNRFLILLAT LMLTAWGLWA VRSTPLDALP DLSDVQVIIR TPFPGQAPQI
VENQVTYPLT TTMLSVPGAK TVRGYSFFGD SFVYVLFEDG TDLYWARSRV LEYLNQVQSR
LPAAAKPALG PDATGVGWIY EYALVDKTGQ HDLSQLRALQ DWFLRFELKS LPNVAEVASL
GGMVKQFQVV LMPDRLRAYN LSQAKVLAAL KGANQETGGS VLELGEAEYM VRASGYLKTL
DDFRQIPLTT NDAGIAVRLG DVATLQLGPE MRRGIADLNG QGEVAGGVIV MRSGKNALET
IEAVKAKLAT LQKSLPAGVE IVPTYDRSAL INRAVENLTH KLIEEFIVVA LVCLVFLFHL
RSALVAIVSL PLGVLAAFLV MRYQGVNANI MSLGGIAIAV GAMVDAAVVM IENAHKHLER
WHEENPNREL EGHERWSVIG ESAAEVGPAL FFSLLIITLS FIPVFTLEAQ EGRLFSPLAF
TKTYSMAAAA GLSVTLVPVL MGYMIRGRIP TEQSNPLSRW LIRLYQPMLA KVLAYPKATV
GIAAVLLIAT AWPVMRIGGE FMPPLDEGDL LYMPSALPGL SAGKAAQLLQ QTDRLIKTVP
EVASVFGKAG RADTATDPAP IEMFETTIQF KPREQWRPGM TTDKLVEELD RVVKVPGLSN
IWVPPIRNRI DMLATGIKSP VGIKVAGTDL KEIDRLTTRI EEAVKTVPGV TSALAERLSG
GRYIDVDIDR MAAGRYGLNI EDVQSIVSSA VGGDNVGEVV DGLARFPINV RYPRDYRDSV
EQLRSLPIVT DRGQQITLAD VARIQVVQGP PMLRSENARL SGWVYVDIRG RDLRSAVKDM
QAAVAKAVPM PAGYALSWSG QFEYLERASA KLKVVVPFTL LIIFVLLYLV FGRIDEALLI
MGTLPLALIG GFWLLYLLGY NLSVAGVVGF IALAGVAAEF GVIMLLYLKQ AWTERQEAGQ
NTIPALLEAI QEGAVLRVRP KAMTVAVILA GLIPIMWAHG TGSEIMQRIA APMVGGMVTA
PLLSLFVVPA VYLLIRRRQT KSSPLPTHPS HQEESP
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