Gene Rpic12D_5341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5341 
Symbol 
ID8007838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp230762 
End bp232027 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content61% 
IMG OID644822549 
Producthypothetical protein 
Protein accessionYP_002973809 
Protein GI241114334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT TGACAAGAAC GCTCATTGAG CGATGGAAAG CTGACAGGGA CGGGACATAT 
CAGACGTGGT TTCTCTGGCC GGAGCGCCTC AAGAACTTCC GCTCCATTCG GCGCGGCATC
GGCGCGGTCG TCAATGAGAT TCAAGCTGGG ACATTCGGCA ACGCCTATCG CGGGTCCCCC
CTCGAAACCG TGGTCTCCTC GATTGCAGAG CAGCGCCAGA TCTTCAAGGG GGCGGACCAT
GCCTTCCTCT GGAAGCCCAA ACTGCGCATC CCGGACATCT ATGAGAATGC CGATCATCAG
CGAGCGTTCG CCAGGCTGCT GCATACGTGC AATTGCTGCG ACACCGAACA AGAACTGGTT
CAAGCGATTC AGCAGTTGAA CCAACACGGC ATCAAGGGGC TGGGCCCGGC CGTCGCCAAC
CTGCTGTACT TCATTCACCC GACGCTGGCG GTTCCCTTCA ACACCGCGAT CGTCAACGGA
TACAACGCGC TGACGGGTTC TCGCGTCAAG CTCGGGAAAT GGGACCACTA CCTGGCCATG
CGCGAGGGTG TGCTGTCCCT GAATGGTCGC TACCGCGACC TCCTGTCCAA CGATTTGGGC
GCAGTTGCCG GACTGCTGTT CGATATCGGA ATGGAGCGCT ATCCGGCGCC GCCGCGAGAA
GGCGATGCTG CCACGATCGC TGAGTGGGAG AGCAATCTGG CCAAGGCGCG CGAGGAAGCG
GCCTCCTTCG CCAAACAACT TCAGGCGGGA CGAACCGACG ATGCCTCCCA TACAGAGGTG
CAAGGCTGGT TGCGCGATCT CGGCAAGGCA CTGGGCTTCG CAGTATGGGT GGCAACCAAC
GACCGTAGCC GCCCTTACAA CGGCGGCGTG CTCAGCGATG GCTGCCTGGC AACGTTGCCG
AACTCGCTGT TGGTAGCGGG TGCCGACACC GTGCCCCTTA TCGACGTCGT TTGGCTGAAC
GCTGCTTCGC TGGAGGTGGA AGCCGCCTTC GAGGTCGAAC ACACCACTTC GATCTACTCA
GGCATCGTGC GACTGCTTGA TTTAGCCCTG GGCACAGAAC AGCCGGCGAA GAAACACCTG
TTCCTGGTTG CGCCGGATGG ACGAGAGGCC GACGTGCGCG CTCAACTTGC ACGCCCCGCC
TTCAGCCGCG TATCGGAACT TGGCATCCGA TATGTGCCCT ACACCAGCCT CACCGAGCAC
CGGGAAACCA TGGCCCGGTT CGGCGCAGGT ATCAAGCCGA TTGAAGCCAT CGCCAAAACG
CTCTGA
 
Protein sequence
MTDLTRTLIE RWKADRDGTY QTWFLWPERL KNFRSIRRGI GAVVNEIQAG TFGNAYRGSP 
LETVVSSIAE QRQIFKGADH AFLWKPKLRI PDIYENADHQ RAFARLLHTC NCCDTEQELV
QAIQQLNQHG IKGLGPAVAN LLYFIHPTLA VPFNTAIVNG YNALTGSRVK LGKWDHYLAM
REGVLSLNGR YRDLLSNDLG AVAGLLFDIG MERYPAPPRE GDAATIAEWE SNLAKAREEA
ASFAKQLQAG RTDDASHTEV QGWLRDLGKA LGFAVWVATN DRSRPYNGGV LSDGCLATLP
NSLLVAGADT VPLIDVVWLN AASLEVEAAF EVEHTTSIYS GIVRLLDLAL GTEQPAKKHL
FLVAPDGREA DVRAQLARPA FSRVSELGIR YVPYTSLTEH RETMARFGAG IKPIEAIAKT
L