Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5341 |
Symbol | |
ID | 8007838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012849 |
Strand | - |
Start bp | 230762 |
End bp | 232027 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644822549 |
Product | hypothetical protein |
Protein accession | YP_002973809 |
Protein GI | 241114334 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATT TGACAAGAAC GCTCATTGAG CGATGGAAAG CTGACAGGGA CGGGACATAT CAGACGTGGT TTCTCTGGCC GGAGCGCCTC AAGAACTTCC GCTCCATTCG GCGCGGCATC GGCGCGGTCG TCAATGAGAT TCAAGCTGGG ACATTCGGCA ACGCCTATCG CGGGTCCCCC CTCGAAACCG TGGTCTCCTC GATTGCAGAG CAGCGCCAGA TCTTCAAGGG GGCGGACCAT GCCTTCCTCT GGAAGCCCAA ACTGCGCATC CCGGACATCT ATGAGAATGC CGATCATCAG CGAGCGTTCG CCAGGCTGCT GCATACGTGC AATTGCTGCG ACACCGAACA AGAACTGGTT CAAGCGATTC AGCAGTTGAA CCAACACGGC ATCAAGGGGC TGGGCCCGGC CGTCGCCAAC CTGCTGTACT TCATTCACCC GACGCTGGCG GTTCCCTTCA ACACCGCGAT CGTCAACGGA TACAACGCGC TGACGGGTTC TCGCGTCAAG CTCGGGAAAT GGGACCACTA CCTGGCCATG CGCGAGGGTG TGCTGTCCCT GAATGGTCGC TACCGCGACC TCCTGTCCAA CGATTTGGGC GCAGTTGCCG GACTGCTGTT CGATATCGGA ATGGAGCGCT ATCCGGCGCC GCCGCGAGAA GGCGATGCTG CCACGATCGC TGAGTGGGAG AGCAATCTGG CCAAGGCGCG CGAGGAAGCG GCCTCCTTCG CCAAACAACT TCAGGCGGGA CGAACCGACG ATGCCTCCCA TACAGAGGTG CAAGGCTGGT TGCGCGATCT CGGCAAGGCA CTGGGCTTCG CAGTATGGGT GGCAACCAAC GACCGTAGCC GCCCTTACAA CGGCGGCGTG CTCAGCGATG GCTGCCTGGC AACGTTGCCG AACTCGCTGT TGGTAGCGGG TGCCGACACC GTGCCCCTTA TCGACGTCGT TTGGCTGAAC GCTGCTTCGC TGGAGGTGGA AGCCGCCTTC GAGGTCGAAC ACACCACTTC GATCTACTCA GGCATCGTGC GACTGCTTGA TTTAGCCCTG GGCACAGAAC AGCCGGCGAA GAAACACCTG TTCCTGGTTG CGCCGGATGG ACGAGAGGCC GACGTGCGCG CTCAACTTGC ACGCCCCGCC TTCAGCCGCG TATCGGAACT TGGCATCCGA TATGTGCCCT ACACCAGCCT CACCGAGCAC CGGGAAACCA TGGCCCGGTT CGGCGCAGGT ATCAAGCCGA TTGAAGCCAT CGCCAAAACG CTCTGA
|
Protein sequence | MTDLTRTLIE RWKADRDGTY QTWFLWPERL KNFRSIRRGI GAVVNEIQAG TFGNAYRGSP LETVVSSIAE QRQIFKGADH AFLWKPKLRI PDIYENADHQ RAFARLLHTC NCCDTEQELV QAIQQLNQHG IKGLGPAVAN LLYFIHPTLA VPFNTAIVNG YNALTGSRVK LGKWDHYLAM REGVLSLNGR YRDLLSNDLG AVAGLLFDIG MERYPAPPRE GDAATIAEWE SNLAKAREEA ASFAKQLQAG RTDDASHTEV QGWLRDLGKA LGFAVWVATN DRSRPYNGGV LSDGCLATLP NSLLVAGADT VPLIDVVWLN AASLEVEAAF EVEHTTSIYS GIVRLLDLAL GTEQPAKKHL FLVAPDGREA DVRAQLARPA FSRVSELGIR YVPYTSLTEH RETMARFGAG IKPIEAIAKT L
|
| |