Gene Rpic12D_5297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5297 
Symbol 
ID8007794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp186327 
End bp186989 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content58% 
IMG OID644822507 
Producthypothetical protein 
Protein accessionYP_002973767 
Protein GI241114292 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.524073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACG ACACACAATC CGGCTACGGG CTCTGGTCGT TGGTCATCAT CAACTCGGCC 
ATCTTCATCA TCTTCGCTTT CAGCTTCACC AAGCCAAAGA CCTCGCGTGA CTGGCGGTCC
TTCGGGGCCT TCTCGGCGTT TCTCGTGGCG CTGTTTACGG AGATGTACGG GTTCCCACTG
ACGATCTACT TGTTGCTGCC CTGGTTGAGC AAGCATTTTC CCGGTATCGA TTTCCTCTCT
CACGACGCGG GGCATTTGCT GGAGGTGATG TTCGGCTGGC GCGCTAATCC GCATTTCGGG
CCGTTCCACA TCCTAAGCAA CCTGCTGATC TTCGGTGGTT TCATCATGCT CGCTTCCGCC
TGGCGGGTGC TGTATCTGGC GCAGCAGCAG CACCGTCTGG CCACCGGTGG ACTCTATACC
CGCATGCGCC ATCCGCAATA TGTGGCGTTT GTCCTGATCA TGCTCGGCTT CCTGCTGCAG
TGGCCGACGT TGCTCACGCT GATCATGTTT CCAGTGCTGG TCTGGATGTA TGTTCATCTC
GCGCTGACTG AGGAGCGAGA TGCGCTGGCC GAGTTCGGCC GGGCATACGA AGCGTATTGT
GAGCGCACAC CACGTTTCAT CCCCCGTTGG AGCAGTGGTG CGTCGAAGGC GTCGTCTCAT
TGA
 
Protein sequence
MQHDTQSGYG LWSLVIINSA IFIIFAFSFT KPKTSRDWRS FGAFSAFLVA LFTEMYGFPL 
TIYLLLPWLS KHFPGIDFLS HDAGHLLEVM FGWRANPHFG PFHILSNLLI FGGFIMLASA
WRVLYLAQQQ HRLATGGLYT RMRHPQYVAF VLIMLGFLLQ WPTLLTLIMF PVLVWMYVHL
ALTEERDALA EFGRAYEAYC ERTPRFIPRW SSGASKASSH