| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5293 |
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| Symbol | |
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| ID | 8007790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 183046 |
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| End bp | 185499 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644822503 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_002973763 |
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| Protein GI | 241114288 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCG ATTCCATCGG ACACCATCGT GGCGATCAAG TGGTCGGTCG GCAGAGCGCG
CTGCGCATCG CTCAACCGGT CGTCGATGCC GGTCGCGTGC GCGATCCGGT TTGCGGTATG
GAGATTTCCC CTGCGCAGGC AGCAGCCAGC ACGGAAGTCG GGCATCAGCG CTATTGGTTC
TGTTCTCGGC ACTGTGAGAA GACTTTTCTC GCTGATCCGG CGCGATATCT CTCGCATGAC
GCGCATGACG CGCATGACCA CGACGGCGCG GCCCATGATC ACGCGCCAAC CGGAGTTGCT
GCGGTGTCCG CAAGCACGAA GCAACTGGCC AAGGACCCCA TCTGCGGAAT GATGGTTGAC
AAGGCCACTG CCTTGTCCGC AGAGCGAGGA GGGCGAAAGT ACTACTTCTG CAGCGAGAGC
TGTCTGCACA CGTTTGAGTC GCCGGAGTCC GAACTGAAGG CGATGAAGAC GCGCGTCACC
ATTGCCTTGA CCGGTGTGCT GGCGTTGGCG GTGTTACGCG CCGGGGCGTT TCTGGCCTTG
GCTGCAGGTG CGACCCTGCT GACTTGGGCG CCCATTCCGG CGCTGCCTTG GTTCACATGG
GGAATATGGC TGTTCCTGCT GGTGACCCCC GTACAGTTCA TTGGAGGTTG GAGCTTCTAC
AAAGGCGCGT GGAACGCGGT CCGCACGCGC AACATCAACA TGGATTTCCT GATCGCGCTG
GGTACGTCGG TAGCGTACTT CTACAGCGTG GTCGTGTTGT TCTTCCCATC CTGGTTGCCG
GTGAAGGTGG CCGAACGCGA TGTCTACTTC GAGGTGTCCG CGGTCATCAT CGCTTTTGTG
CTGCTGGGCA AGTACATGGA GGAGATCATC AAAAAGAAGT CCTCCGCCGC AGTCCGTCGC
CTGCTTGACC TCAAGCCCGC TGTGGCGCAC GTGATTCGCG ATGGCAAGGA AGTCGAGATT
CCCGCCGAAA GCATCATGGT CTCGGAGCTG GTAGTGGTCC GCCCCGGCGA GAAGATTCCA
ACCGATGGCA AGGTGACGGA CGGGCAAACC AGCGTGGACG AATCGATGCT GACCGGGGAG
TCGATGCCAG TTGACAAGAA GCCTGGGGCA ACGGTGATCG GCGGTACGCT GAACCGGTCA
GGCGCCTTTA CGTTCCAGGC GACCCGCATC GGTGCGGATA CGGCGCTGGC GCAGATCATC
AAGATGGTAG AAGACGCGCA GGCAAGCTCG GCACAGATTC AGCGGCTGGC CGACCAGGTG
ACCGGCTATT TTGTGCCGGC GGTCGTGGGC GTTGCACTGC TGGCTGTCAT CGGATGGACG
CTCGCGGGGC ATTTCCCGCA GGGGCTGCTC GCCTTTATTG CCGTGCTTAT CATCTCCTGC
CCGTGCGCTC TGGGTGTAGC GACGCCTGCC GCCTTGATGG TCGGCGTGGG AAAAGGCGCG
GACGCCGGCA TCCTGATCCG CGGCGGCGAA GTGCTCGAAC GCGCTGAGAA ATTGACCACC
GTTGTCTTTG ACAAGACGGG CACGATTACG CGCGGCGAAC CGACCGTGAC CGATATCCTG
CCGCTTGGGA CACACCAGGA AGCCGAGCTG CTCAGTATTG CTGCAGCGGT CGAGTCCGGC
TCGGAGCATC CGCTGGGCGA AGCGATCGTC CGTGCCGCAC AGCATCGTGA GCTGGCGACG
CGTAAGGCGA ACAACATCCA GGCGCTGTCG GGGATGGGTA TTCAGGGGGC CATCGACGGC
CAGCAGGCCT GGCTAGGAAA CCGGCGCATG CTCGCGCAGC AGGCCATCTC AGTCGATACG
ATTGAAGCGA CGCTGGCCGG GCTGGAGGCT GATGGCAAGA CAGCGATGCT GGCGGGGATC
GGGCATGAAC TGCTTGGCAT CATCGCCGTG GCCGATACGG TCAAGCCAGA GGCGTCAGAG
GCCATTGCCA TGCTCAAGTC GCGCGGCATC AAGGTGGTTC TGCTCAGTGG GGATAACCAG
CGCACCGCGC AAGCTATCGG GCGGCAGGTC GGCATCGAGC GCGTAATCGC AGAGGTCATG
CCGGAAGACA AGGTCAAGAC CATCCAGGGC TTGCAGAAGG ACGGCGAGGT GGTTGCCATG
GTCGGCGATG GGGTCAACGA CGCGCCCGCG CTCGCTGCGG CGGATATCGG CGTCGCTATC
GGCTCGGGCT CGGATGTGGC CAAGGAGACC GGCAGCATCA TCCTGATCCG CAATGACGTA
CGCGACGTGG CGGCTTCCAT CGAGTTGTCC CGCGCCACGA TGCGCAAGAT CAAGCAGAAC
CTGTTTTGGG CCTTCTTCTA CAACACCATC GGCATTCCGG TGGCGGCTTT CGGCCTGCTC
AATCCCATCC TGGCGGCGGC GGCGATGTCG CTGTCCTCGC TTAGCGTGGT GGCGAATTCG
GCCATGCTCA AGCGCGTGCG GCTGACAAGT AAGGCGCAGG AGGTGCCGGC ATGA
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| Protein sequence | MPSDSIGHHR GDQVVGRQSA LRIAQPVVDA GRVRDPVCGM EISPAQAAAS TEVGHQRYWF
CSRHCEKTFL ADPARYLSHD AHDAHDHDGA AHDHAPTGVA AVSASTKQLA KDPICGMMVD
KATALSAERG GRKYYFCSES CLHTFESPES ELKAMKTRVT IALTGVLALA VLRAGAFLAL
AAGATLLTWA PIPALPWFTW GIWLFLLVTP VQFIGGWSFY KGAWNAVRTR NINMDFLIAL
GTSVAYFYSV VVLFFPSWLP VKVAERDVYF EVSAVIIAFV LLGKYMEEII KKKSSAAVRR
LLDLKPAVAH VIRDGKEVEI PAESIMVSEL VVVRPGEKIP TDGKVTDGQT SVDESMLTGE
SMPVDKKPGA TVIGGTLNRS GAFTFQATRI GADTALAQII KMVEDAQASS AQIQRLADQV
TGYFVPAVVG VALLAVIGWT LAGHFPQGLL AFIAVLIISC PCALGVATPA ALMVGVGKGA
DAGILIRGGE VLERAEKLTT VVFDKTGTIT RGEPTVTDIL PLGTHQEAEL LSIAAAVESG
SEHPLGEAIV RAAQHRELAT RKANNIQALS GMGIQGAIDG QQAWLGNRRM LAQQAISVDT
IEATLAGLEA DGKTAMLAGI GHELLGIIAV ADTVKPEASE AIAMLKSRGI KVVLLSGDNQ
RTAQAIGRQV GIERVIAEVM PEDKVKTIQG LQKDGEVVAM VGDGVNDAPA LAAADIGVAI
GSGSDVAKET GSIILIRNDV RDVAASIELS RATMRKIKQN LFWAFFYNTI GIPVAAFGLL
NPILAAAAMS LSSLSVVANS AMLKRVRLTS KAQEVPA
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