| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5284 |
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| Symbol | |
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| ID | 8007989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 171505 |
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| End bp | 173907 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644822494 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_002973754 |
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| Protein GI | 241114279 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.225774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGATT GCGGCTCCAA GGGGTGCGGT TGTGCTGCCA CCAACGTGGT GACGCCGGCG
GACGGCGATG CGGCGGCTGT TGACCTGAAA CGATCCCGCT ACCGGATCGA CAACATGGAC
TGCCCGACGG AAGAAACGCT CATTCGCAAT AAGCTGGCGG CGCTGCCCGG CGTGGTCAAC
CTTGAGTTCA ACCTGATGCA GCGTTCGCTG GCCGTCCAGC ACCGGCTGCC ATCCCCGGCG
CCGATCGAGC AAGCCTTGGC AGCCGTTGGC ATGCGAGCGG TTCGCGCCGA TGAAAGCCCC
GCCGGGCAGA GCACAGTCCT GACCATTCGT CAGATGGACT GCCCGACCGA AGAAACGCTG
ATTCGCGGCA AGCTGGCGGG CATGGCGGGC GTGTCAGACA TGCAGTTCAA TCTCGTCCAA
CGCACACTCG CCGTTCAACA CGCTGCCGAT GCGCTACCGC AAGTGCTGGC TGCCATTCAG
TCGCTTGGCT TCGATGCCGA GGTGCGCGAC CGCTCTGCCG CAGCACCGCT TCCCGAACAA
GATGCCGCGC CCACCAAATG GTGGCCGCTT GCCATTGCCG GCGCGAACGC CGTCCTGGCG
GAAGTGGTGT ATTGGCTCAA CGGTGGCAAC CATTGGGTGG TGGTGATCCT GGCGCTGGCC
GCGATCCTGA CCGGCGGGCT GTCCACCTAC AAGAAAGGCT GGATCGCGCT CAAGAACCGC
AACCTGAACA TGAACGCCCT CATGTCGATC GCAGTCACTG GGGCGATGGT GATCGGCCAT
TGGCCGGAAG CGGCGATGGT GATGGTCCTC TTCGCCTTGG CGGAGGTCAT CGAAGCCCGT
TCGCTGGACC GCGCCCGAGA TGCGATCCGG GGGCTGATGG ATCTCGCCCC GGAGACAGCC
ACGGTACAGC GCAGCGACGG CAGTTGGTCC GACGTCGATG CCAAGACCGT GGCCGTTGGC
AGCCGTGTGC GGGTCAAGCC GGGCGAGCGC ATCGCGCTCG ATGGCACGAT TCTGCAGGGG
CGGTCATCCG TCAATCAGGC GCCGATCACG GGCGAGAGCC TGCCGGTCGA GAAGGCAGCG
GGCGACTCCG TGTTCGCCGG CACCATCAAC GAATCCGGGT CGTTCGAATA TCGCGTCACC
GCAGCGGCAA GCGACTCCAC ACTGGCACGG ATCATTCACG CCGTCGAGGC CGCGCAAGGC
AGTCGAGCGC CCACGCAGCG CTTCGTTGAC CAGTTCGCCC GGCTGTACAC GCCCATTGTG
TTCGCGGTTG CGCTTGCGGT GGCCATCGTC CCTCCGCTGG TCTTCGGTGC GACTTGGCTG
GACTGGATCT ACAAGGCCCT AGTTCTTCTC GTGATTGCTT GCCCCTGCGC GCTCGTGATC
TCGACGCCGG TGAGCATTGT GAGCGGCCTG GCGGCCGCCG CGAAGCGCGG CATCCTCATC
AAGGGCGGCG TCTATCTGGA AGAGGGACGC AAGCTGAAAT GGTTGGCGCT CGACAAGACC
GGCACGATCA CGCACGGCAA GCCAGCGCAG ACGGACGTCG TGGCCTGGAA CGGTGCGGAC
GCGTCCGCCG CCCAGATCCT GGCAGCTAGC CTGGCTGCCC GCTCCGACCA TCCCGTCTCC
CTGGCCGTGG CCCGCGCGGC GCAGGACCAA GGCCTAGCCC TGCGCGACGT CACCGATTTT
GCGGCCTTGC CCGGACGCGG CGTCCGGGGC CATGTCAACG GTGCGCTCTA TCACCTGGGC
AATCATCGTC TGGTCGAGGA ACTGGGCGTG TGTTCGCCGG CATTGGAAGC ACAGCTTGCC
GTGCTGGAAA CCCAGGGCAA AACGGTCGTG ATGCTGATCG GCCAGGACGG CGTACGCGCG
TTGTTCGGTG TGGCGGACAC CATCAAGGAC AGCAGTCGCC AAGCGATCAA GGAATTGCAC
GCACTGGGCA TCAAGACTTT GATGCTGAGC GGCGACAATC CGCACACCGC AGAGGCGATT
GCGCAGCAGG TCGGTATCGA CGAGGCTCGC GGTAATCTGC TGCCGGAAGA CAAGCAGCGC
GAAATCGAGC GCCGATCCGC ACAAGGAACC ATCGGCATGG TCGGCGATGG CATCAACGAT
GCGCCGGCGC TGGCACGGGC CGATATTGGA TTCGCAATGG GCGCGGCCGG GACGGACACG
GCGATCGAAA CGGCCGACGT TGCGCTGATG GACGACGATC TGCGCAAGCT CCCGGCGTTT
GTACGACTAT CCCGGTCCAC GGCCGGGGTG CTGAAGCAGA ACATTGCGCT GGCGCTCGGC
ATCAAGGTCG TGTTCCTGGC ACTGACCTTT ACAGGCCAGG CCACCATGTG GATGGCGGTG
TTTGCCGACA TGGGCGCCAG CCTGCTGGTG GTCGGCAACG GGCTGAGGTT GCTGCGCAAA
TGA
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| Protein sequence | MSDCGSKGCG CAATNVVTPA DGDAAAVDLK RSRYRIDNMD CPTEETLIRN KLAALPGVVN
LEFNLMQRSL AVQHRLPSPA PIEQALAAVG MRAVRADESP AGQSTVLTIR QMDCPTEETL
IRGKLAGMAG VSDMQFNLVQ RTLAVQHAAD ALPQVLAAIQ SLGFDAEVRD RSAAAPLPEQ
DAAPTKWWPL AIAGANAVLA EVVYWLNGGN HWVVVILALA AILTGGLSTY KKGWIALKNR
NLNMNALMSI AVTGAMVIGH WPEAAMVMVL FALAEVIEAR SLDRARDAIR GLMDLAPETA
TVQRSDGSWS DVDAKTVAVG SRVRVKPGER IALDGTILQG RSSVNQAPIT GESLPVEKAA
GDSVFAGTIN ESGSFEYRVT AAASDSTLAR IIHAVEAAQG SRAPTQRFVD QFARLYTPIV
FAVALAVAIV PPLVFGATWL DWIYKALVLL VIACPCALVI STPVSIVSGL AAAAKRGILI
KGGVYLEEGR KLKWLALDKT GTITHGKPAQ TDVVAWNGAD ASAAQILAAS LAARSDHPVS
LAVARAAQDQ GLALRDVTDF AALPGRGVRG HVNGALYHLG NHRLVEELGV CSPALEAQLA
VLETQGKTVV MLIGQDGVRA LFGVADTIKD SSRQAIKELH ALGIKTLMLS GDNPHTAEAI
AQQVGIDEAR GNLLPEDKQR EIERRSAQGT IGMVGDGIND APALARADIG FAMGAAGTDT
AIETADVALM DDDLRKLPAF VRLSRSTAGV LKQNIALALG IKVVFLALTF TGQATMWMAV
FADMGASLLV VGNGLRLLRK
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