Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5131 |
Symbol | |
ID | 8007711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012849 |
Strand | + |
Start bp | 29870 |
End bp | 31123 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644822345 |
Product | hypothetical protein |
Protein accession | YP_002973605 |
Protein GI | 241114130 |
COG category | [S] Function unknown |
COG ID | [COG3174] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.285021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.133381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCTA ACGTCAACGA GCATCTGATC TCTTTTCTGA CCAGCCTGGC CATCGGCCTT CTGATCGGGG TTGAGCGTGA ACGCGCCGGT TCGGCAATGG GGTTACGAAC TTCGGCCTTG GCCGCGCTGT TCGGCTCCAT CGCCGCCCTC GTCGGCCAGA GCGTCGGGGC GCCGTGGTTT CTCCCTGCCG CCTTGCTGGC CATGACGGGC ATCATGGTTT TCGGTCAGAC CGCGACCGGG GAGAGCGAGA GCCACGCTGG CCCCACCACA CGAATGGCCA TCCTGCTTTC GTTCACCCTC GGAGCGATGG TTTGGCTCGG CCACGGTCGT TATGCTGTTA TGCTAGCCAT TGCTGCCGCA GCGCTGCTCC ATTTCAAGGC CGAACTGCGC GGCTTGAGTT CACGGATTAC TTCCCGCGAC CTGGTGTCGA TCCTGCAGTT CGCTACGCTG AGTTTTATCG TGCTGCCGCT CCTGCCCAAC GTCGGTTATG GACCCTATGG CGCTTTCAAT CCTCACCACG TCTGGATGAT GGTCGTCCTG ATATCCGGCT TGAGCCTCGC CGGCTATTTG GCCATGCGTG CGGTCGGAGA TCGCTTTGGC CCGCCCTTGC TCGGTCTGCT GGGAGGACTG GTGTCGAGCA CCGCGACTAC CCTGGTGTAC GCCCGTCATG CCCGCCAGAC GCCGACCATG GCGCTGACGT CGTCGATCGT CATTCTCATG GCCAATCTGG TCTTGTCCGT GCGCCTGGGC ATGATCGCCG TTGCCATCGC GCCCTCCTTG ATGGCGACCC TTTGGCCAGT GTTGGTCGGC AACCTGGTGG CAGGCGGCTT GGCGGTACTG TTCGTCTGGC ATCGTTCGCG GACGGGGGGG CCACTTCTTT TGCCGGAAGT TGCCAATCCG ACCGAGTTAC GGGTTGCGCT GAGCTTCGGT GCGATGTATG CCATCATTTT ACTTTTAGCC TCGTGGCTGT CCGATTGGGC GGGAACCCGC GGGCTCTACC TGGCGTCCGC CGTGTCCGGG CTGACCGAAC TTGATGCCAT CGCATTGTCG ACCCTGCGCC TGTTTGGGAA TGGGAAACTG GGCGCCGAGG TAGCCGCTAA CGCGATCGGC CTGGCGATTC TCTCTAACCT GTGCTTCAAA ACTGGCCTCC TCGCCTGGGT CGCAGGGCGC GACTTCCTGT TGCGCTGCCT GCCTGGGATG ATGGCTATCG GGATAGGCAT TGCAATCGGC ATGGGGTGGG TTGGCTATGC TTGA
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Protein sequence | MDPNVNEHLI SFLTSLAIGL LIGVERERAG SAMGLRTSAL AALFGSIAAL VGQSVGAPWF LPAALLAMTG IMVFGQTATG ESESHAGPTT RMAILLSFTL GAMVWLGHGR YAVMLAIAAA ALLHFKAELR GLSSRITSRD LVSILQFATL SFIVLPLLPN VGYGPYGAFN PHHVWMMVVL ISGLSLAGYL AMRAVGDRFG PPLLGLLGGL VSSTATTLVY ARHARQTPTM ALTSSIVILM ANLVLSVRLG MIAVAIAPSL MATLWPVLVG NLVAGGLAVL FVWHRSRTGG PLLLPEVANP TELRVALSFG AMYAIILLLA SWLSDWAGTR GLYLASAVSG LTELDAIALS TLRLFGNGKL GAEVAANAIG LAILSNLCFK TGLLAWVAGR DFLLRCLPGM MAIGIGIAIG MGWVGYA
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