| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5115 |
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| Symbol | |
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| ID | 8007901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 17098 |
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| End bp | 18105 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644822333 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002973593 |
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| Protein GI | 241114118 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0274682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAA GGACAACAGT TTGGAAGGTC GCGCCCGCGA TCATCGCAAT GACGAGTGAA
GTCGCGCTGG CCCAGTCGAA CGTGGAGGTA TTCGGCATCG TCGATACGGC AGTTGAGTGG
GCACGCAGTG GAGACGGAGT CAATGTCAAC CGGCTGGTCT CGGGGCAGAA TTCAGCGTCG
CGTTTCGGCA TGCGGGGCAG CGAAGATATC GGCGGCGGAC TCAAGGCCAA TTTCTGGCTT
GAGAACGGCT TCAACACGGA CACCGGCGCG CTGTCCGATA GCGCAAGGCT GTTCAACAGA
CGTGCGACGG TCGGCCTGTC GGGGCCATGG GGGCGCGTTG ATCTCGGTCG CCAGTTCCGC
CCCGAAGCCC GCGCCGTGTT CGGCATGGAC CCATTTGATG GGGGCTCCAC AGCATCGCCC
TCCAATACCT ACTCCAACAC GGTGTTCCGC ACCGACAATG CGGTCGTGTA TGAGACGCCA
AACGTGAACG GCTTCGTGGG CCGGCTCATG TATGCCTTCG GCGAGGCACC CGGCGCGTTC
AACGGTGCCA ACAACGATGT CGGCGCCTCC CTTCAGTACT ATAACGGTCC GGTCTACCTC
GCCTATGCTT ATGACGCGCG CACCAACGCG ACCAACAGCG ACAAGCGAAG GTGGCACTCG
TTGGGAGGCG CGTACGACTT CGGCGTGGCG AAGCTGTATG CCGCCTATCG CACCCGCAAG
GAAGGTGCCG TGGGCCTCGA CGAGAGCAGC TACTGGTTGG GTGTCAGCGT GCCGCTAGGT
GCGTGGACCC TCTCCGCAAC CGCAACGCGC GTCAATGACA AGACACCAGC CGACAAAGGT
GCAACCGGAA TCGGATTGGG TGCCGACTAT GCCTTGTCGA AGCGAACGAC GTTATACGGC
CGGTTCGGCA AGGTCAACAA CAAGAACGGG GCAACGTTCA ATTTGGACAA CGGCATCAAC
GGCCCCAGCC CCAGCTCGTT GGCACTCGGC TTGCGGCACA AATTCTGA
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| Protein sequence | MRIRTTVWKV APAIIAMTSE VALAQSNVEV FGIVDTAVEW ARSGDGVNVN RLVSGQNSAS
RFGMRGSEDI GGGLKANFWL ENGFNTDTGA LSDSARLFNR RATVGLSGPW GRVDLGRQFR
PEARAVFGMD PFDGGSTASP SNTYSNTVFR TDNAVVYETP NVNGFVGRLM YAFGEAPGAF
NGANNDVGAS LQYYNGPVYL AYAYDARTNA TNSDKRRWHS LGGAYDFGVA KLYAAYRTRK
EGAVGLDESS YWLGVSVPLG AWTLSATATR VNDKTPADKG ATGIGLGADY ALSKRTTLYG
RFGKVNNKNG ATFNLDNGIN GPSPSSLALG LRHKF
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