| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5108 |
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| Symbol | |
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| ID | 8007894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 11200 |
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| End bp | 12102 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644822326 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002973586 |
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| Protein GI | 241114111 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00133603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACCACA GACAGATAGA GGCGTTCCGC GCGATCATGT TGACGGGCAC GACTGCCCGC
GCGGCTCAGT ACATGCATAC CTCGCAACCC GCGGTCAGCC GGTTGCTCGC CCAGCTCGAA
GCAAGCCTGC AGATGCGCTT GTTTGAGCGA GAGCGTTCGC GGTTGCGAGC GACGCCGGAA
GCGAAGCTGT GGTTTGCGGA AATTGAGCGT GCCTATGCCG GCCTGGATCA TCTGCAGCAG
TACGCGACTC AACTGCGCTC TGGATCAGGC GGAAGCATTG CCGTGGCTTG TTTGCCTGCT
CTCGGCCTGG GTCTGATGCC AAGAATCATT GCCGCCTTGC GCAAGGACTT TCCTGATGTG
CTGGTCCGAT TCGAGATTGG CAGCTCCGTG CAGGTGCGTG ATCAGGTCGC GCGAGGCCAG
TGCGATATCG GCTTCGCCGC TGATGAGGTC GAACTCGAAG GATTGACCGC CACACCCATC
GTGACAACCA ACGCGGTGGT CGCGATGCCG GTCAACCATC CATTGGCACG CCAACGACGC
GTGAAGCTCT CCGATCTATG CGATCACCCG TTCATCGCCC TGTCACGCCG GGATACGACG
CGCCGTCAAC TCGACGAGTT GCTGGCAGTG GACGGACGGA CGTTGCGCTT GGCCTGCGAG
ACCCCCTACT CGATCACCGT CGCGTCGCTG GCGAAGAATG GCGTCGGCAT TGGCCTTGTG
AACCCGCTCG CATTGAGCGA GCTGGACGCG CGAGGCGCGG CGTTTCGCCC CTTGGACAAG
AAGATCCGTT TCCGGACGCT GGCGTTGCAG GCGGCCAGTG TGCCTCTTTC GCTACCGGCA
CAGGCGTTTA TGGCGCACGC TAGACGTATT CTCGCGGCGG CGGCAAAGGA GGCAGGCTCT
TGA
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| Protein sequence | MNHRQIEAFR AIMLTGTTAR AAQYMHTSQP AVSRLLAQLE ASLQMRLFER ERSRLRATPE
AKLWFAEIER AYAGLDHLQQ YATQLRSGSG GSIAVACLPA LGLGLMPRII AALRKDFPDV
LVRFEIGSSV QVRDQVARGQ CDIGFAADEV ELEGLTATPI VTTNAVVAMP VNHPLARQRR
VKLSDLCDHP FIALSRRDTT RRQLDELLAV DGRTLRLACE TPYSITVASL AKNGVGIGLV
NPLALSELDA RGAAFRPLDK KIRFRTLALQ AASVPLSLPA QAFMAHARRI LAAAAKEAGS
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