Gene Rpic12D_5101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5101 
Symbol 
ID8007887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp4321 
End bp5586 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content59% 
IMG OID644822319 
Productcopper resistance B precursor 
Protein accessionYP_002973579 
Protein GI241114104 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3667] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.082477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC ATAAGCACGT TAAGACAGCA TTGGCAGTTG CCTTGGCCGT TGTCGGCATC 
AACGCCGCGT CGGCACAGGA ATCTACAGCT ACCTACGACG CCATGGCGCC AAGCTCGGGC
GCCAGCACTC GGCCGACTGC CCATGGCTCG ATGCAGGGCA TGGACCATGG CTCGAAGCAG
GGCATGGACC ATGGCTCGAT GCAGGGTATG GACCATGGCT CGATGCAGGG TATGGACCAT
GGCTCGATGC AGGGTATGGA CCAGGGCTCA ATGCAGGGTA TGGACCAGGG CTCAATGCAG
GGTATGGACC AGGGCTCAAT GCAGGGTATG GACCATGGCT CGATGCAGGG TATGGACCAT
GGCTCGATGC AGGGTATGGA CCATGGCTCG ATGCAGGGTA TGGACCAGGG CTCAATGCAG
GGTATGGACC AGGGCTCAAT GCAGGGTATG GACCAGGGCT CAATGCAGGG TATGGATCAG
GGCTCAATGC AGGGTATGGA TCATGGTTCG ATGCAAATGC AAGGCGGCTC ACCGCCTCCT
GATGCGCGGG ATCCGAATGC ATACTCGGGT GGATATCAGT TGGGTGTCGG AAAGTTCGCG
CTGGGCAATA CCCGCCAGCT CATGATGGCC GATGAGCACA ATTTTGGATC GTTCTTGATT
GATCGCCTGG AGTGGGTACG CGGCCCCAAC TCCAACGCCG CTTCTTACGA AGCGCAAGCG
TGGTACGGAA GCACTTACGA CAAGGTCGTG CTGAAGGCGG AAGGCGATGT GAAAAAAGGT
CGACTCGAGG AGGCGCGTAC CGAGTTGCTA TGGGGGCATG CGATCACGAC GTTCTGGGAC
ACCCAGCTTG GGATTCGCAA TGACGTTGGC TCGGGGCGTC CAGCGCGGAA CTGGGCGGCT
TTCGGTGTGC AAGGTCTGGC GCCATACTGG TTCAACATCC AGGCCACTGC ATACGTTGGT
AACAGTGGTC GTACCGCCCT GCGGTTGTCC ACGGAGTATG AGTTGCTGCT GACTCAGCGC
CTTATCCTAC AACCGCGCGT GGAGGCGAAC CTCTACGGAA AGAATGATCC GGCTTTGGAG
ATCGGCAGCG GCCTGTCCAG CGCTAGCGTC GGATTGCGTT TGCGTTACGA GTTCAGTCGG
CAATTCGCGC CTTACATCGG CGTCGAGCGG TATCAGACTT TTGGCAACAC CGCCAACATG
ATTCGGGCAG ATGGCGGCCG AAGCGGTGAG ACCCGATTTG TGGCAGGCCT GCGTGTTTGG
TACTAG
 
Protein sequence
MTTHKHVKTA LAVALAVVGI NAASAQESTA TYDAMAPSSG ASTRPTAHGS MQGMDHGSKQ 
GMDHGSMQGM DHGSMQGMDH GSMQGMDQGS MQGMDQGSMQ GMDQGSMQGM DHGSMQGMDH
GSMQGMDHGS MQGMDQGSMQ GMDQGSMQGM DQGSMQGMDQ GSMQGMDHGS MQMQGGSPPP
DARDPNAYSG GYQLGVGKFA LGNTRQLMMA DEHNFGSFLI DRLEWVRGPN SNAASYEAQA
WYGSTYDKVV LKAEGDVKKG RLEEARTELL WGHAITTFWD TQLGIRNDVG SGRPARNWAA
FGVQGLAPYW FNIQATAYVG NSGRTALRLS TEYELLLTQR LILQPRVEAN LYGKNDPALE
IGSGLSSASV GLRLRYEFSR QFAPYIGVER YQTFGNTANM IRADGGRSGE TRFVAGLRVW
Y