| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5099 |
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| Symbol | |
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| ID | 8007885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 1505 |
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| End bp | 2191 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644822317 |
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| Product | two component heavy metal response transcriptional regulator, winged helix family |
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| Protein accession | YP_002973577 |
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| Protein GI | 241114102 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0773075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTCC TTGTTGTCGA AGACGAATCC AAGACTGGCG AATATTTGCA GCAGGGGCTG
TCGGAAGCCG GCTTTGTTGT TGACCTCGCC CGTAATGGGA TGGACGGCCG TCATCTTGCA
ATGACGGGCG ACTATGACCT CTTGATCCTT GACGTGATGT TGCCCGATCT CGAGGGGTGG
CAGATTCTGC ACGCGCTGCG CTCAGCTGAA CTGGCCGTAC CGGTGCTGTT TCTGACCGCG
CGCGATAGCG TCGCCGATCG GGTCAAGGGC TTGGAACTAG GCGCGGACGA TTACTTGGTG
AAACCTTTTG CATTCGCGGA ATTGCTCGCC CGTGTTCGGA GCCTGCTTCG ACGAGGCAGT
GCGCCATCAC TTGCAGAACG CATCCAGGTG GCCGACCTGG TGCTGGATCT GACTCGCCGC
CGTGCTTCCC GCGGCGGGCA GCGAATCGCG TTGACCAGTA AGGAATTCTC GTTGCTCGAA
CTGCTAGCCC GCCGTCATGG GGAGGTGCTG CCCCGATCCC TGATCGCGTC CCAAGTCTGG
GACATGAATT TCGACAGCGA CACCAACGTG ATTGACGTCG CCATTCGACG CCTGCGCGCC
AAAATTGACG ATAACTTCGA ACCCAAATTG ATCCATACCG TTCGTGGTAT GGGTTATGTC
CTCGAAGGCC CGGAGGATGG GGAGTAA
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| Protein sequence | MKLLVVEDES KTGEYLQQGL SEAGFVVDLA RNGMDGRHLA MTGDYDLLIL DVMLPDLEGW
QILHALRSAE LAVPVLFLTA RDSVADRVKG LELGADDYLV KPFAFAELLA RVRSLLRRGS
APSLAERIQV ADLVLDLTRR RASRGGQRIA LTSKEFSLLE LLARRHGEVL PRSLIASQVW
DMNFDSDTNV IDVAIRRLRA KIDDNFEPKL IHTVRGMGYV LEGPEDGE
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