Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5260 |
Symbol | |
ID | 8007434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | + |
Start bp | 674258 |
End bp | 674917 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644822168 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002973428 |
Protein GI | 241113593 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.571687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCACA CTTTTCTCGA ACAACTCTGG ATCGCCCGAT ACGTCATCAT GAACGGCATC GGCGTGACCG TGTCGATCTC CCTGCTGGCC ATCCTTGCGG GTTCCATACT TGGCGTTTTC GTCGGTTTGG CGCTCGTCTA TGGCGGCGTT GTTTTGCGGC TGGCCGTGCG TGCCTATACG GATATCATCC GTGGCACGCC GGTGCTCGTA CTGGTGCTGG CGAGCTACTA CGTCTCCGCC GCCGTCGGCC TCGATCTCGG GCCGTTCTCG GCCGGGGTGC TCGCCCTTGC CGTCTTCTGC TCCTCCCATG TCGGCGAAAT CGTGCGCGGA GCGCTTCAGG CAATCCCGAA GGGCCAGACC GAAGCCGCCA AGGCGATCGG CCTGACCTTT ACCCAGACTT TCACCTCTGT GCTGTGGCCG CAGGCCATGC GCCAATGCCT GCCGGCCTGG GTGAATACGG CGGCCGAGAT GGTGAAAGCC TCGACGCTGC TCTCCGTCAT CGGCGTTGCG GAGCTTCTCC TACGCACGCA GGAGATCATC TCCCGCAATT TCATGAGCCT CCAGTTCTAC TTCCTGGCCG GTGGTCTCTA TTTCATCATC AACTACGGCA TCGAGCACTT CGGCAAATAT GTCGAGCGCA AGACCGCCCT GCCGTCCTGA
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Protein sequence | MSHTFLEQLW IARYVIMNGI GVTVSISLLA ILAGSILGVF VGLALVYGGV VLRLAVRAYT DIIRGTPVLV LVLASYYVSA AVGLDLGPFS AGVLALAVFC SSHVGEIVRG ALQAIPKGQT EAAKAIGLTF TQTFTSVLWP QAMRQCLPAW VNTAAEMVKA STLLSVIGVA ELLLRTQEII SRNFMSLQFY FLAGGLYFII NYGIEHFGKY VERKTALPS
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