| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5253 |
|---|
| Symbol | |
|---|
| ID | 8007427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 665796 |
|---|
| End bp | 666443 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644822161 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002973421 |
|---|
| Protein GI | 241113586 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTTG CCGACGAGCC CGTAGATGAG CCGCGCAAGC GAGGCCGGCC GAAAGTCTCC
AGCGACGAGG ACAAGCGGGC GCATATCGTC GAAATTGCCC GCCGCGTTTT TGTAAAATGC
GGCTATGCCG GAAGTACGAC CGCAGTCGTC GCCAGCGAGG CGGGTGTTTC AAAACAGACG
CTTTACAAGC TGTTTCAGAG CAAGGAAGAG CTGTTTGCCG CTGTGGTCGG CGCGCATCGG
CGCCTGATGC TCGACCTGCC GCGGCCTGCT GAAGATATCT CGATCGCCGA GAGCCTCGAA
CGCATCTTCA TGATCGATAT GGATGAGGAC AAGGACGCGG ATCGTGCCGG TTTCCTGCAA
CTCGTCTTTC GCGAGGCGGG GCAGTTTCCC GAGCTCGTCG ATATTCTGCA GCGCGAAGGC
ATGCTTGCCA GCCGGCAGGA CCTCACCGAC TGGCTGAGCC ACCGTAGGGC GGAAGGCAAG
TTGTCGCTTG ATGATCCGGC CAGCGGAGCC CGGATGCTGA TGGATATGAT TTTCGGCGGC
ATGGGTCCGC CGGAAGGGCG CGCTCAGGCC TGGCCTGATC GGGCGGTGCT GCTTGCCCAT
CTCAGGCGTT GCATTGCAAT CTTTTCGGCG GGCGTCGGGG CCGCTTAA
|
|---|
| Protein sequence | MDVADEPVDE PRKRGRPKVS SDEDKRAHIV EIARRVFVKC GYAGSTTAVV ASEAGVSKQT
LYKLFQSKEE LFAAVVGAHR RLMLDLPRPA EDISIAESLE RIFMIDMDED KDADRAGFLQ
LVFREAGQFP ELVDILQREG MLASRQDLTD WLSHRRAEGK LSLDDPASGA RMLMDMIFGG
MGPPEGRAQA WPDRAVLLAH LRRCIAIFSA GVGAA
|
|---|
| |