Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5217 |
Symbol | |
ID | 8007112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | + |
Start bp | 628989 |
End bp | 629807 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644822126 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_002973386 |
Protein GI | 241113551 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.592377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATG CTGAGCTGCA GATCGGCTGC CAAACATTCA CCTGGGAGAT GCTGGGCACG GGTTGGAGCG GCGGTCCGGA CGATCTGGTG CGCGCCATTG CCGACGGCGG ATATGCCGGT ATCGAAATCA CCGACACGAT GATCGGTCAC TACGCGCTGA AGCCCGCCGA CTTTGCCCGC ACCCTGACGG ATGCCAGTTT GGCGCTGGTT TCCTTTGCCT TCGGCTCCGC CAGCGGATTC ACGGTGGCGG AAAAGATTGC CTCCGATCTC GACGCGGCGC GGCGATGGGT CGATTTCGCA GCGAACTTTC CCGGCGCGAT GATATCGATG GGATCGGCGA CGGTCGTCTC GGATGGTCCG CGCGATGAGA AATTCGCCAT TGCGGCGGAG TGCTACAATC ATGCAACCGA GATCGGACGG TCGGCTGGCG TCGCTGTAGC TGTCCATCCT TCCTCGCACC ACAACACGCT GCTGTTCACG CGGAACGACT ATGATCAGCT GTTTGCTCTC TTGGATCCAC AGGTGGGTTG GGTGCCGGAT ACCGGTCATA TCCTGCGTGG CGGCCAGCAG ATCGGCGATA CGCTGGCGGC CCACCGGGAC CGGATCCGCT ACGTGCATCT GAAGGATGTC GACGCCGGCG GGACCTGGGC GATGCTGGGC GAAGGCGTCT GCGACGTGCC TGCCGTGGTT TCGACCGTTC GGGATGCGCC GAACTTTATC GGCTGGATCG TGGTGGAAGA AGAATCGGAC CATGCCGAAA CCGATCCTGC CGCCGCCGTT CGAGCGAACC GCGAGACGCT TCGACGTCTG GGGTTTTAG
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Protein sequence | MKNAELQIGC QTFTWEMLGT GWSGGPDDLV RAIADGGYAG IEITDTMIGH YALKPADFAR TLTDASLALV SFAFGSASGF TVAEKIASDL DAARRWVDFA ANFPGAMISM GSATVVSDGP RDEKFAIAAE CYNHATEIGR SAGVAVAVHP SSHHNTLLFT RNDYDQLFAL LDPQVGWVPD TGHILRGGQQ IGDTLAAHRD RIRYVHLKDV DAGGTWAMLG EGVCDVPAVV STVRDAPNFI GWIVVEEESD HAETDPAAAV RANRETLRRL GF
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