| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5174 |
|---|
| Symbol | |
|---|
| ID | 8007070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 580457 |
|---|
| End bp | 581410 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644822084 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_002973344 |
|---|
| Protein GI | 241113509 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0202491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.065211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG CAACCATGCG CAAGGCGCTT ACAGGCGTAT CGGGTGTTCC CGTCACCGCC
TATGACGGCA AAGGTGAAGT CGAACCACGG ATCACGGCGA AAGTCTATGA GCGGGTGGCG
GCAGCCGGCA TTCACAACAT CGTCGCTGCC GGCAATACCG GGGAATTCTA TGCTCTGACG
CCGCAGGAAA TCAGGATCGT TCATGAGGCG GCGGTTTCAG GCGTCAACGG CAAGGCGCCG
GTGACGGCGG CAATCGGCCG GTCGCTGCGC GAGGCGATCG GCATGGCGAA AGATGCGGCG
ACGATCGGCG CATCCGCCGT CATGTCTCAT CAGCCCGTCG ATCCTTTCGC AGCACCTTCG
GCCCAGATCG ACTATTTCTG CAATCTTGCG GATGCTTCCA CCCTGCCGCT CGTCGCCTAT
GTCCGGGCAG AAGGTTTCGG CGTCGACGAT ATCATTCGTC TCGCAAACCA CGGCAATATT
GCCGGCATCA AATTTGCCAC GACCGATCTG ATGCTGCTTT CCAGAGCGAT CGCTGCGGCC
GATCCGGCCG GCGCACTGTT CGTCTGCGGC CTGGCGGAGA GTTGGGCGCC GACATTTACG
GCTGCGGGTG CGCGCGGCTT CACATCCGGC CTCGTCAATG TTGCGCCGCA TCTGTCGCTT
GCCGTTCACA ATGCGCTCGA AAGAGGAGAC TTCGGCGCGG CCAGGGCTAT CGTCAACCAG
CTTGAACCAT TCGAGAGGAT GCGGACAAAA TTCCGCAATG GCGCGAACGT GACTGTCGTC
AAGGAGGCCG TCACCTATTC CGGCCTCGAT GTCGGCCCCG TGCGCGTGCC GGGATTGCCG
CTGCTCGATC GGCATGATCG CGAGGAACTC CATCGGCTGC TTCGGGGCTG GGATGCCGCC
GGCAACAACC AGATCCGTCC ACACCAGCAG GATTCCGCAA AGGCGGCCGG CTGA
|
|---|
| Protein sequence | MSIATMRKAL TGVSGVPVTA YDGKGEVEPR ITAKVYERVA AAGIHNIVAA GNTGEFYALT
PQEIRIVHEA AVSGVNGKAP VTAAIGRSLR EAIGMAKDAA TIGASAVMSH QPVDPFAAPS
AQIDYFCNLA DASTLPLVAY VRAEGFGVDD IIRLANHGNI AGIKFATTDL MLLSRAIAAA
DPAGALFVCG LAESWAPTFT AAGARGFTSG LVNVAPHLSL AVHNALERGD FGAARAIVNQ
LEPFERMRTK FRNGANVTVV KEAVTYSGLD VGPVRVPGLP LLDRHDREEL HRLLRGWDAA
GNNQIRPHQQ DSAKAAG
|
|---|
| |