Gene Rleg_5052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5052 
Symbol 
ID8007645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp435555 
End bp436391 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content57% 
IMG OID644821967 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002973227 
Protein GI241113392 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.482027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CAGGACGCAA GGTGACCGTC AGATCGGTCG CGATCTACGC CATCGTCATC 
GCCGTCACGC TCATCATGCT GATGCCGTTT GTCTGGATGC TTTCGGCATC GCTGAAGCTC
AGCCGCGACG TGTTCGCCTT CCCGATCGAG TGGATACCGT CCGAGCCGCA ATGGCATAAC
TACGTCGATA TCTGGACGAA GATCCCGCTC GCGCTCTTCA TCTACAACAC GTCGAAGCTG
ACGATCATCG TCACGCTGCT GCAGCTTTTG ACCTCCAGCT TTGCGGCCTA CGCGTTTGCC
AAGCTGAATT TCCCCTACAA GAACACCCTG TTTCTCGGTT ACATCGCCAC CATCGCCATG
CCCTGGCAGG TCTATATGGT GCCGCAATTC CTGCTGATGC GTGAATTCGG CCTCAACAAC
ACCCATCTGG CGCTGATCTG TCTGCAGGCC TTCACCGCCT TCGGTGTCTT CCTGATGCGG
CAGTTCTACA TGTCGATCCC GACCGAGCTC TGCGAGGCGG CTCGCATCGA CGGCATGAAC
GAGTACCAGA TCTGGGCGCG TATCATGCTG CCGCTGTCGA AGCCCGCACT CTCGACGCTG
ACGATCTTCA CTTTCGTCAC CACCTGGAAC GATTTTCTCG GGCCGATGAT CTACCTGACC
AAGACCGAGC TGAAGACCGT CCAGATCGGC CTGCGTATGT TCATCTCGCA ATATTCGGCC
GAATACGGGC TCATCATGGC TGCCTCCGTT GTCGCCCTCA TTCCGGTTCT CGTCGTATTC
CTCTCTCTCC AGCGTTTCTT CGTCGAGGGC ATAGCCTCGA CGGGACTGAA GGGTTAA
 
Protein sequence
MKIAGRKVTV RSVAIYAIVI AVTLIMLMPF VWMLSASLKL SRDVFAFPIE WIPSEPQWHN 
YVDIWTKIPL ALFIYNTSKL TIIVTLLQLL TSSFAAYAFA KLNFPYKNTL FLGYIATIAM
PWQVYMVPQF LLMREFGLNN THLALICLQA FTAFGVFLMR QFYMSIPTEL CEAARIDGMN
EYQIWARIML PLSKPALSTL TIFTFVTTWN DFLGPMIYLT KTELKTVQIG LRMFISQYSA
EYGLIMAASV VALIPVLVVF LSLQRFFVEG IASTGLKG