Gene Rleg_5050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5050 
Symbol 
ID8007643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp433253 
End bp434362 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content61% 
IMG OID644821965 
ProductABC transporter related 
Protein accessionYP_002973225 
Protein GI241113390 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.251909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCA TTTCGCTTAA AGAGCTGAAC AAGAGCTACG GTGCGCTCAC CGTCGTCCAC 
GACATCGACC TCGAGATCGC AGACAAGGAA TTCATCATTC TGGTCGGCCC GTCGGGCTGC
GGCAAATCGA CGACGCTGCG GATGATCGCC GGCCTCGAGG AAATATCGGG AGGAGAGCTC
AAGATCGGCG GCGACGTCAT GAACGACGTC CCGTCCAAAG ATCGGGATAT CGCCATGGTG
TTCCAGAACT ATGCGCTCTA TCCGCATATG ACCGTCTACA AGAACATGGC TTTCGGCCTG
CAGCTCAGGA AGGTGTCGCG CGACTTCATC GACGCGCAGG TGCAGGACGC CGCCAGGATC
CTCGACATCT CTCATCTCCT CAACCGCAAG CCGAAGGCGC TTTCGGGCGG GCAGCGCCAG
CGCGTCGCGC TCGGCCGCGC CATGGTGCGC AATCCGGCGG TCTTCCTTCT CGACGAGCCG
CTTTCCAATC TCGACGCCAA GCTGCGCGGC ACCATGCGCT CCGAAATCAC CAAGCTGCAC
AAGCGCCTCA ACGCCACCTT CATCTACGTC ACCCATGACC AGGTCGAGGC CATGACCATG
GCGGATCGGA TCGTCGTCAT GAAGGACGGG CACATCCAGC AGGTGGATAC GCCGCAGAAC
CTCTATGACC GCCCCGTCAA CATGTTCGTT GCCGGCTTCA TCGGCGCACC GCAGATGAAC
ATGCTGCCCT CGACCATTCT GCGCCGGGGC GACGGCTACG TCGCCGTCTT CGACGGCCGG
GAACTGCCGC TGCCTGCCCA TTTCGACAAA AGCAGGATCG CCCCCTACGA GGGTCGCGAA
CTGGTGCTTG GCATCCGTCC GGAGAATTTC CACGAGCTGC CGCCGGCCGA CATCGCGCCC
GAGAACCTGG CGCCTCTCAA GGCGATCGTC GAACTTGCCG AACCGATGGG ATCGGAAGTG
CACCTGAACA TGGTAGCAGG CGGTCGCAAT CTGATCGCCC GCGTCTCGCC GCGTTACCGG
CCTGATATCG GCGAAGAGGC GACGCTGGTC GCCGATATGA CCAATGCGCA GTTGTTCGAC
AATGAAACGG AACGCTCGAT TCTATACTGA
 
Protein sequence
MASISLKELN KSYGALTVVH DIDLEIADKE FIILVGPSGC GKSTTLRMIA GLEEISGGEL 
KIGGDVMNDV PSKDRDIAMV FQNYALYPHM TVYKNMAFGL QLRKVSRDFI DAQVQDAARI
LDISHLLNRK PKALSGGQRQ RVALGRAMVR NPAVFLLDEP LSNLDAKLRG TMRSEITKLH
KRLNATFIYV THDQVEAMTM ADRIVVMKDG HIQQVDTPQN LYDRPVNMFV AGFIGAPQMN
MLPSTILRRG DGYVAVFDGR ELPLPAHFDK SRIAPYEGRE LVLGIRPENF HELPPADIAP
ENLAPLKAIV ELAEPMGSEV HLNMVAGGRN LIARVSPRYR PDIGEEATLV ADMTNAQLFD
NETERSILY