Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5034 |
Symbol | |
ID | 8007625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | + |
Start bp | 420957 |
End bp | 421862 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644821949 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002973209 |
Protein GI | 241113374 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACCTTT CATCGATCGA GATATTCCTC GCCGTTGTCA GCGACCGCAG CGTGACGAAG GCTGCCAAGG CCGTAGGGCG GGTGCCATCG AATGTGACGA CGCGCATCCA GCAACTGGAG GAGGACCTCG GCGTTTCCCT CTTCAGCCGT GATGGCAAGA AGATGACGTT GACGCGGGAG GGGGAGACGT TTTTCGCCTA TGCCAACCGG CTTATGGCGC TTGCGCTCGA AGCGCGCCAG GCCGTGCGGC CTCTCGCCCC ATCGGGGACG TTGCGGGTCG GCACTATGGA GAGCACGGCG GCAAGCAGGC TGCCGGCGGC GCTGATGCAA TTCAATCAGA TGTGGCCCGA TGTGTCGCTT CAGCTGACGA TGGGGGCGTC CCGCGATCTG ACCCGCGATG TTCTCTCTGA TGCGCTGGAT TGTGCGCTGA TTGCCCGCCT GCCGAAGACG ATGCGCGAGG AAGACTCGAG CTTCGATGCC GAACTCAAAG CGCTCGAAAT GGAGCTGACC TTCGTCGAAG ACCTGTTGAT CGTGTTGCCA TCCGGGCATC CCTCCATCAA ATCCGCCGCC GACCTGCGTG TCGGGTCGCT CGCCGCTTTG GAGCCTGGCT GCACCTATCG CAGGATCGCT GAAAACTGGG CGCGTAAATC GAGCGCGCTG CCGACGAGCG AACTCGGTTC CTACCACGCG ATCCTGGCGA GCGTTGCGAC CGGGAACACG GCGGGTGTCA TGCCCCGATC GGTCCTTGAC CTCATGCACT GGCCGACACC GGTCCAGACC CATCAGCTCG GTGCTGTCGA GACGCTGCTC GTCTATCGCA AGAATGATCG CCCCAGCGCG TTCAACGCGT TCCACGAAGT TCTCAGCGCG ACAAAGGGCA GAGATGTCAG GCTGACAACA AACTAG
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Protein sequence | MDLSSIEIFL AVVSDRSVTK AAKAVGRVPS NVTTRIQQLE EDLGVSLFSR DGKKMTLTRE GETFFAYANR LMALALEARQ AVRPLAPSGT LRVGTMESTA ASRLPAALMQ FNQMWPDVSL QLTMGASRDL TRDVLSDALD CALIARLPKT MREEDSSFDA ELKALEMELT FVEDLLIVLP SGHPSIKSAA DLRVGSLAAL EPGCTYRRIA ENWARKSSAL PTSELGSYHA ILASVATGNT AGVMPRSVLD LMHWPTPVQT HQLGAVETLL VYRKNDRPSA FNAFHEVLSA TKGRDVRLTT N
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