Gene Rleg_4981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4981 
Symbol 
ID8007572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp365045 
End bp366214 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content64% 
IMG OID644821896 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002973156 
Protein GI241113321 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.713473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA AGACCGTAGA GGCCTGGTGG ATTAAAATTC CCATCGAGGC GAGCCGTCAG 
CACCGCAGCG ACTTCGGCCG TCTGACGACC TTCGATAGTG CGATCCTGCG GATCGAAACG
GACGACGGCA TCGTTGGCTG GGGAGAGGGC AAGAATGCCG CGGGCAGTTC GGGCACCTAT
GGCACGCTGG TCCACATGCT CAATCACGAG ATTGGGCCGA AGCTCATCGA CCGCGATCCC
GCCGACATCT CCACCATTTG GGAGATGCTC TATAACGGCG TACGCCACGA GACGGCGGCG
AGTTCGGGTC ACGCCATGCC CGAGATCGCG CGGCGCGGCC TTTCCGTCGC GGCTATCAGC
GCGGTCGACA TAGCGCTCTG GGACATTCTC GGCAAGTCGC TCGGCGTCCC CGTCTGGAAG
CTGCTGGGTG GGCGCAAGGC GGACAGGTTG CCCGCCTATG CCTCGGGCGG TTGGGAGAGC
GTGGACCGGA TCGGCGAACA GCTGCGGTCC TATGTCGCGG CCGGTGGTTT CAAGTCGGTC
AAGATGCGTG TCGGTGCGAT GGATCGTGCG CTGCATGTCT CGGCATCGCG CGTGCGGGCG
GCTCGCAAGG CAATCGGCCC CGACGTCGAC CTGATGGTCG ATGCGCACGG CACCTATACT
GTTGCGGAGG CAAAGCGCTT CATCCAGATG GTCGCCGATT GCGACCTCGC CTGGTTCGAG
GAGCCGGTGA TAGCGGATGA CAAGCCGGGC ATGGCGGAGG TGCGCGCGGC TGGGAACGTG
CCGATCGCTG CGGGCGAGAG CGAGGCGACG CGTTTCGCTT TCCGAGATCT TGCCATGCTT
CGGGCCGCCG ACATATTCCA GCCGGATCCC GCCTTCTGCG GCGGCATTAC GGAGGCGATG
CGCATCAGTT CGCTCGCCAG CGCCTTCAAC CTCCGTTTCG CGCCGCATCT TTGGGCCGGC
GCGCCCTGCT TCTTCTCCGG CCTGCACTTG TGCGCGGCCT CCCCGGCAAG CTTCATCATT
GAATATTCGC TCGGCGCCAA TCCGATGATC CACGATCTTG TCGAGGACAC TGTGTCGGTG
AAGGACGGTA TGGTAGAGAT CCCGGACAGG CCTGGCCTGG GCTTCACGAT CAATCAGCGG
GTCCTGGAGA CTCACGCGCA AAGACAGTGA
 
Protein sequence
MRIKTVEAWW IKIPIEASRQ HRSDFGRLTT FDSAILRIET DDGIVGWGEG KNAAGSSGTY 
GTLVHMLNHE IGPKLIDRDP ADISTIWEML YNGVRHETAA SSGHAMPEIA RRGLSVAAIS
AVDIALWDIL GKSLGVPVWK LLGGRKADRL PAYASGGWES VDRIGEQLRS YVAAGGFKSV
KMRVGAMDRA LHVSASRVRA ARKAIGPDVD LMVDAHGTYT VAEAKRFIQM VADCDLAWFE
EPVIADDKPG MAEVRAAGNV PIAAGESEAT RFAFRDLAML RAADIFQPDP AFCGGITEAM
RISSLASAFN LRFAPHLWAG APCFFSGLHL CAASPASFII EYSLGANPMI HDLVEDTVSV
KDGMVEIPDR PGLGFTINQR VLETHAQRQ