Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4975 |
Symbol | |
ID | 8007566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 354139 |
End bp | 355821 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644821890 |
Product | TRAG family protein |
Protein accession | YP_002973150 |
Protein GI | 241113315 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.24546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCATG CCATCAAGAT CAAGATTGCC TTGGCAAACA TGATGCGCAT GGCGGCCCGC GATCCGCTCT GGGCGATCGT CGCCCTGATC ACGTTTCCGC TGCGATATGC CAAGTCGGTT GTCATGGGTG CATTTGGCTA TTTGCTTGTC GTGTTCACCG TCTACTTCGG GATCGACTAC CTCAGACGCG TGATGCTCGC CGGCCACAGG GGTGACGTCA TCTGGCATAT CGGCGATTGG GTGGTCATTC TTTTTGCCGT CGCGCTGCTC ATACGATTGT TGTCGGTTCC CTTGATCACG CATTGCGGAT CGGCGATGGA CGATACGCAT GGGTCTGCGC GCTTTGCCGG CCGAAGAGAG ATTGCGCCGC TCACCAAGGC GGGCAGTGGC CTGCTGATCG GCCGCGCACC CGGTTCCGGA GGCTTGCTGC GATATGACGG ACCAGCTCAC CTGCTCACCA TGGCGCCGAC GCGCAGCGGC AAGGGTGTCG GCACCATCAT CCCGAACCTT CTGACCGCCG ACCGCTCGAT CATCTGCATC GATCCGAAGG GCGAGAATGC GATCATCGCC GGTGATGCAC GAGAGAAGTT CGGGCCGGTT CATATCCTCG ATCCGTTCGG CATCACCGGC GGGCCTTCGG CAGCCTTCAA TCCGATGGAC GGCGTTGATC CAGGCAGCGT CGACGTCGCC GAGGATGCAA CGACACTTGC CGACGCACTC GTGTTCGACG AACCGGGTCT TTCAGGCGAC GCCCATTGGA ACGAGGAAGC CAAGGCACTG ATATCAGGTT TGCTGCTGCA TATCGTTGCC AGCGAACCAA ACGACCGCCG CAATCTGTCG ACGCTTCGGC GCTATCTCAC GCTGGCGCCG GAAACCTTCC GTGCCGTGCT TGACGAGATG CAGGGGACTG GTGCGATCAA CGGCCTGATT GCGCGGGCCG CCAATCGCCA TCTTGGCAAG TCGGACCGTG AGGCAAGCGG CGTGCTGTCG GCGGCGCAAC GACACACGCA TTTCCTCGAC AGTCCGCGCA TGACCGAGGT GCTGTCACGA TCGGATTTCC GGTTTTCCGA TCTTAAGGCA AACAAGGCGA CCGTCTTTCT GGTCTTGCCG CCAGACAGGC TTGCGGCCTA TTCGCGATGG CTGCGTTTGC TGGTGGCCCA GAGCCTGACT GAGATGGCGC GAACGGCACC CTCGCCGCAT CCATCTGCGC CGCCGGTTCT CTATCTGCTC GACGAGTTCG CCGCCCTTGG TCATCTGGCG CCGATCGAAC GGGCCATGGG ATTGATGGCA GGTTACGGTG TGCAGCTCTG GCCGATCATC CAGGACATTC ATCAGCTGCG CGCCACCTAT GGCCAGCGCG CCGGTACGTT TTTATCCAAC GCCGGCGTGC TGCAGGTGTT CGGCGTCAAT GATCACGACA GCGCCCGTCT GGTCTCCGAT CTGCTTGGCC AGGAGACGGT CGTCTTCAAC ACGGCGGCGC GCGCGCTCGA TTCGGAAAGG ACCGGCCTCT CCTTTGCCGA GCAGCATGTC GGCCGCCCGC TGCTGACGCC CGACGAAGTG CGCAACATGC ATGCCAGGAC CGAGCTGCTG TTCATCGCCG GCCAGCGGCC GATCGTTGCG ACGAAGTTGC GCTATTATGC CGATCCGGAA TTTGCCGGAT TGTTCACTGC GTCACAGATC TGA
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Protein sequence | MIHAIKIKIA LANMMRMAAR DPLWAIVALI TFPLRYAKSV VMGAFGYLLV VFTVYFGIDY LRRVMLAGHR GDVIWHIGDW VVILFAVALL IRLLSVPLIT HCGSAMDDTH GSARFAGRRE IAPLTKAGSG LLIGRAPGSG GLLRYDGPAH LLTMAPTRSG KGVGTIIPNL LTADRSIICI DPKGENAIIA GDAREKFGPV HILDPFGITG GPSAAFNPMD GVDPGSVDVA EDATTLADAL VFDEPGLSGD AHWNEEAKAL ISGLLLHIVA SEPNDRRNLS TLRRYLTLAP ETFRAVLDEM QGTGAINGLI ARAANRHLGK SDREASGVLS AAQRHTHFLD SPRMTEVLSR SDFRFSDLKA NKATVFLVLP PDRLAAYSRW LRLLVAQSLT EMARTAPSPH PSAPPVLYLL DEFAALGHLA PIERAMGLMA GYGVQLWPII QDIHQLRATY GQRAGTFLSN AGVLQVFGVN DHDSARLVSD LLGQETVVFN TAARALDSER TGLSFAEQHV GRPLLTPDEV RNMHARTELL FIAGQRPIVA TKLRYYADPE FAGLFTASQI
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