Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4893 |
Symbol | |
ID | 8007275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | + |
Start bp | 275591 |
End bp | 276520 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644821817 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_002973077 |
Protein GI | 241113242 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.202209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT TTATCCTGGG CACTGCGATG GCGCTCGTCA TGTCGACGGT GGCTCACGCG GAAACTGTCG GCGTCTCGAT GGCGAAATTC GACGACAATT TCCTGACGGT TCTGCGCAAC GGCATGACCG ATTATGCAAA GACACTGAGC GGTGTGACGC TGCAGGTCGA AGACGCACAG AACGACGTTT CCAAGCAGCA GAGCCAGATC CAGAATTTCA TCGCCTCCAA GGTCGATGCA ATCATCGTCA ACCCTGTCGA TACCGATGCG ACCACGGCAA TGTCGAAGCT CGCGGCCGAT GCCGGCATCC CGCTGGTTTA CGTCAACCGT CAGCCGGTCA ACGTCGACAC GCTGCCGGAC AAGCAGGCCT TCGTCGCATC CAACGAGCAG GAATCCGGCA CTCTGGAAAC CAAGGAAGTC TGCCGCATTC TCGGCGGCAA GGGCAAGGCC GTCGTCATCA TGGGCGAGCT TTCCAACCAG GCTGCGCGCA TGCGGACCCA GGACATCCAC GACGTCATCA AGACGGATGA ATGCAAGGGC CTGGAGATCG TCGAAGAGCA GACGGCCAAC TGGGACCGCA CCCAGGGCGC CGACCTGATG ACCAACTGGC TCTCGAGCGG CATCGAATTC GACGCCGTGA TCGCCAACAA CGACGAAATG GCGATCGGCG CCATTCAGGC GCTGAAGGCG GCCGGCAAGG ATATGACCAA GGTCGTCGTC GGCGGCGTCG ACGCCACGCA GGATGCGCTT GCCGCCATGC AGGCGGGCGA TCTCGACGTC ACGGTGTTCC AGGATGCCGC CGGCCAGGGC AAGGGCTCGC TCGATGCAGC GCTCAAGCTC GCCAAGGGCG AAAAGATCGA GAAGAAGGTC TACATTCCCT TCCAGCTCGT CACACCTGCC AACGTCAAGG ACTTCGTCAC CAAGAACTGA
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Protein sequence | MKKFILGTAM ALVMSTVAHA ETVGVSMAKF DDNFLTVLRN GMTDYAKTLS GVTLQVEDAQ NDVSKQQSQI QNFIASKVDA IIVNPVDTDA TTAMSKLAAD AGIPLVYVNR QPVNVDTLPD KQAFVASNEQ ESGTLETKEV CRILGGKGKA VVIMGELSNQ AARMRTQDIH DVIKTDECKG LEIVEEQTAN WDRTQGADLM TNWLSSGIEF DAVIANNDEM AIGAIQALKA AGKDMTKVVV GGVDATQDAL AAMQAGDLDV TVFQDAAGQG KGSLDAALKL AKGEKIEKKV YIPFQLVTPA NVKDFVTKN
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