Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4862 |
Symbol | |
ID | 8007250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012848 |
Strand | - |
Start bp | 243057 |
End bp | 243767 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644821792 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002973052 |
Protein GI | 241113217 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.556045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.353938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCCGAAA CCAGCGATTT CAAAGCAAAG CCCCCCGAAG GGATCGACCC CATCGGGGCC TCCAGCGAGG GCGCCTCGCT TTATCAACTG ATCAGGGAAG ACATCATCGA AGGGCGGCTC GCTGCCAACG AGCGGCTTGT GGTCACCGAT CTCGCCCGGC GCCACGGTAC CTCAACCAAC CCCGTGCGCG AGGCTCTGCA ACTGTTGCGT GGCGAGGGCT TTGTCACCCT CGTTCCCAAC CGCGGAGCAC GCGTGCGGCC CATAGACCAG GATTTTGTTC GGGACATCTA CGAGATCGGA GTCTTGATCG AGCCGGCCCT GACGCGATGG TTCGTGAATA TGGCCACCGT CGAAGACATT GCTGAGCTCG AACGAATCCA GGGCCTGATT GAAGAAAACG ACTTCGCCGA CACGTTCAGG CACAGCGAGC TGGACACCGC CTTTCACACC GTCATGTACC AAAAGCACTA CAACCGCCAT GCCGCCGAGC TTTGGTGGAA GCATCGCGAA GTGCTTCGAG CCGTGAGCCG GCGTTTCAAC TTCACGCTCG CCCGGCGTGC CGCGATCCTT AGCGAGCATC GCGAGCTTAT CGCGCATGTA AAAGCGGGAA ATGCGAGCGA GGCAGCCGAA CTCATTGCAC GCCATGTCGA GGGCTCCGGC CGGCACATCC TCGAACACAT GCGTGCGCGT AACGCCGCTC GGGCAGGATA G
|
Protein sequence | MAETSDFKAK PPEGIDPIGA SSEGASLYQL IREDIIEGRL AANERLVVTD LARRHGTSTN PVREALQLLR GEGFVTLVPN RGARVRPIDQ DFVRDIYEIG VLIEPALTRW FVNMATVEDI AELERIQGLI EENDFADTFR HSELDTAFHT VMYQKHYNRH AAELWWKHRE VLRAVSRRFN FTLARRAAIL SEHRELIAHV KAGNASEAAE LIARHVEGSG RHILEHMRAR NAARAG
|
| |