| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4766 |
|---|
| Symbol | |
|---|
| ID | 8007019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 136527 |
|---|
| End bp | 137912 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644821696 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_002972956 |
|---|
| Protein GI | 241113121 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.134291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.334258 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAT ATTCCTTCCC GAGCGACGAG GATGAAATCC ATCGCCACAT CGTCGAGAGC
GCGCTCGACT ATGCGATCTT TGCCATGGAT CTCGATGGCA CTGTGGCGAC GTGGAGTGCC
GGTGCGGAAA ACCTCTTCGG CTATTCGGCA TCCGAGATGA TCGGACAGAA TGGGGTCATC
ATCTTTTCAT TCGAGGATCA ACTCGCCGGA GCGCCGCTCA AAGAGAAGCG GCTTGCGCTG
ACCACCGGCC GCGCCGACGA CAATCGGTGG CACGTCAGAA AAGACGGCAG CATGTTCTGG
GCGTCAGGGC TGATGATGCC GCTTCGCAAC GACGTGGGTG GGATCTACGG CCTGGCGAAA
ATCGTCCGGG ACCGGACCCT GACGCTTCAG CAGGACGAAG CGTTGCGCGC CAGCGAGGAA
CGCCTCCAGC TTATTCTTAA AAGCGCGATC GATTACGCGA TCTTTTCCTT TGATCAAGAT
GGGCGGATCA TCAGTTGGAA CACCGGGGCT TGCCGCATCT TTGGATATCC GGAAGATGAG
ATTCTCGGTC AAGACGCACG CATTCTCTTC GTACCGGAAG ACCGCACCGA GGGCCATGTG
GCGCTTGACC GCGAGATGGA GACGGCGCTT GAGCGCGGCC GGGCTGAAAA CGAACGATTT
CATTTGCGTA AGGATGGATC CACGTTCTGG GGCAGCGGAT TGACCATGCC GCTGCGCGCC
CATCATCAAA GAGCCGGCTA TCTCAAGGTA CTTCGGGATG ACACCGAGCG TCACTTTGCA
GATGAGCACC AGCAAATCAT GCTGCGCGAG ATGAGCCATC GTGTCAAAAA CAGCCTGACA
CTGGTCACCG CCATGCTTTC GATGCAGGCC CGCTCGGCTG AACAGCAGGA GGTGGGAGAG
GCTTTGCGCG ATGCCGAAGC GCGCGTCGGC ACCATTGCCC AGGTACACGA TCAATTGTGG
CGCCAACCGA ACATCGAAAC GGTGGAACTG GCGGATTTTC TGTCAAGCCT GTGTCTGCGC
CTGCAGCAGG CGGCATCAAA GCACACGGTT TCGGTCGACG CGGATGCGTG CGTTATCGAT
GCAGACCGGG CAATCCAGCT TGCCCTTCTC GTCAACGAAC TGGTGACGAA CGCCTTCAAG
CACGCTTATT CCGATATTTC AGGCACTGTC ACCGTCAGTG CGCGCGCCAC CGCCGACGAA
ATCCGCCTTG AAATCGCCGA TGATGGAAAA GGTTTCCCGG ACGGATTTTC CGTCTCTAAA
AATGACGGCA AGAGCTTGGG CATGAAGGTC GTGCGCGTTC TGGTGCAGCA GTTGAGGGCC
GAGCTTCACA TCGAGAATCG GCGGCCCGGC GCGAGTTTTC TGATCCGTCT GCCCCGGAAT
CCCTGA
|
|---|
| Protein sequence | MDQYSFPSDE DEIHRHIVES ALDYAIFAMD LDGTVATWSA GAENLFGYSA SEMIGQNGVI
IFSFEDQLAG APLKEKRLAL TTGRADDNRW HVRKDGSMFW ASGLMMPLRN DVGGIYGLAK
IVRDRTLTLQ QDEALRASEE RLQLILKSAI DYAIFSFDQD GRIISWNTGA CRIFGYPEDE
ILGQDARILF VPEDRTEGHV ALDREMETAL ERGRAENERF HLRKDGSTFW GSGLTMPLRA
HHQRAGYLKV LRDDTERHFA DEHQQIMLRE MSHRVKNSLT LVTAMLSMQA RSAEQQEVGE
ALRDAEARVG TIAQVHDQLW RQPNIETVEL ADFLSSLCLR LQQAASKHTV SVDADACVID
ADRAIQLALL VNELVTNAFK HAYSDISGTV TVSARATADE IRLEIADDGK GFPDGFSVSK
NDGKSLGMKV VRVLVQQLRA ELHIENRRPG ASFLIRLPRN P
|
|---|
| |