| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4684 |
|---|
| Symbol | |
|---|
| ID | 8007160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 48652 |
|---|
| End bp | 49530 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644821618 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002972878 |
|---|
| Protein GI | 241113043 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCAC GCTCGTCCGA ACGCCGGAGC CCCGGACCAT TTTCCCGCGC CTTCAGTCGG
TTTCTGCTCA ACCGCGCAGC TGTTGCCGGC GTCTGCATTG CCACGCCAAT GCTGCTGCTG
ATCCTCTCCT ATCCCCTATG GTGGGCTTTC CGGCCGAACG ACATCGATCT TCTGGCCATG
AATAGCGGGC CGACGGCAAC GCACTGGTTC GGAGCCGACG GCGTCGGCCG CGACGTCTTC
GCCCGCGTGC TCGAAGGCGG CCGGATTTCG CTGCTGGTCG CCGTCGCATC GACCGCGCTT
TCTGCCGTCA TCGGGTTTCT TTTTGGGGCA ACCTCGGCGC TTGCCGGACG CTGGACGGAC
GCCGTCTCGA TGCGCTTCGT CGATCTGGTG ATGACCCTGC CACCCGTCAT CTTCCTGCTT
GTGCTCGCGT CGATTGCCGG CACCGGCATC TGGCCGACTG TGCTGGTCAT CTCGCTGCTC
TCCTGGCCGC TGCTTGCGCG CATGATCCGC TCGCGGCTGC TGGAATTGCG TGAGCGCGAC
TTCGTCATGG CCGCCCGCGG CATGGGCGCC GGCATCGGCC ATCTGCTCTT CCGCCACGGC
CTGCCGAACT CGATCGATAT CCTCGTGGTC TATGCAACGC TACAGATCGC CAATGCCATT
CTGCTCGAGG CGGGACTGTC CTTCCTCGGT CTCGGCATCG CCCCGCCGGC GGCAAGCTGG
GGCAACATGC TGAACGCGGC CCGCTCGACC GCCGTGCTCG AACAATATCC GTGGCAATGG
CTCTTCCCCG GCGCCGCGCT GATCCTTGCC GTCCTGGCGA TCAACTTCAT TGGCGATGGC
CTCAGAGATG CCTTCGATCC GCGTGCCGAA CTGAACTGA
|
|---|
| Protein sequence | MLARSSERRS PGPFSRAFSR FLLNRAAVAG VCIATPMLLL ILSYPLWWAF RPNDIDLLAM
NSGPTATHWF GADGVGRDVF ARVLEGGRIS LLVAVASTAL SAVIGFLFGA TSALAGRWTD
AVSMRFVDLV MTLPPVIFLL VLASIAGTGI WPTVLVISLL SWPLLARMIR SRLLELRERD
FVMAARGMGA GIGHLLFRHG LPNSIDILVV YATLQIANAI LLEAGLSFLG LGIAPPAASW
GNMLNAARST AVLEQYPWQW LFPGAALILA VLAINFIGDG LRDAFDPRAE LN
|
|---|
| |