| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlut_13280 |
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| Symbol | |
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| ID | 7984948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Micrococcus luteus NCTC 2665 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012803 |
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| Strand | - |
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| Start bp | 1451594 |
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| End bp | 1453087 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644806289 |
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| Product | RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_002957387 |
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| Protein GI | 239917829 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00389203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGGACG GCAAGGAGAC CACTGCCTCC GAGGCCACGA CCACGCGCAC CCGCTCCACG
GCAGCCAAGA AGTCGGCAGC CACGAAGAGC GCCACGACCA AGGGCGCCAC GACGCGGACG
ACCGCGACGA AGTCGGCGGC GACCAAGACC GCTGCCACGC CGACGGCCAA GAAGAAGGCG
ACCCGGAAGC CCACCGCGGC CAAGACCACC GCCACGGCCA AGACCACCGC CACGGCCAAG
ACCACCGCCG CGAAGAAGAC CGCCACGACC GGGGGCAAGA AGGCCACCGC GTCCGCCGCC
TCCGCCGAGC AGGCCGAGGA CGACGAGGAG CTCGTCCAGG CGCGCGAGCG CACCGAGGCC
GCGGACGCCG TCGAGGAGGA CGTGGTGGCG GACGAGACCG CCACCGAAGA CTCTGATGAT
GAGGACGCGG ACGGCTCGGA CGCTCCGGAG CGCCCGGCGA TGGACGCGGA GGCCGTGACC
GGCACGACGG CCGCCACAGG CCAGAAGGTG GCCCAGTCCA AGGGCGCGTT CGTCATGGAC
GACTCCGAGG ACGACGCCCC GGTGCAGCAG GTGGTCGTGG CGGGCGCCAC GGCGGACCCG
GTGAAGGACT ACCTGAAGCA GATCGGCAAG GTCGCCCTGC TCAACGCCGA GCAGGAGGTG
GACCTGGCCA TGCGCATCGA GGCCGGCCTC TACGCCGAGC ACGTCGTGCA GCACGAGGCC
TCCGACGACT ACCGCGAGCG CCGGGACATC CAGCTGATCA TCGCGGACGG GCGCAAGGCC
AAGAACCACC TGCTCGAGGC CAACCTGCGT CTGGTGGTCT CCCTGGCCAA GCGCTACACC
GGTCGCGGCA TGCTGTTCCT GGACCTCATC CAGGAGGGCA ACCTCGGCCT GATCCGCGCC
GTCGAGAAGT TCGACTACAC CAAGGGCTTC AAGTTCTCCA CGTATGCCAC GTGGTGGATC
CGTCAGGCCA TCACCCGCGC CATGGCGGAC CAGGCCCGCA CCATCCGCAT CCCGGTGCAC
ATGGTGGAGG TCATCAACAA GCTGGCCCGC GTGCAGCGGC AGATGCTCCA GGACCTCGGC
CGCGAGCCCA CCCCGGAGGA GCTGGCCAAG GAGCTGGACA TGACCCCGGA GAAGGTCGTG
GAGGTGCAGA AGTACGGCCG CGAGCCCATC TCCCTGCACA CCCCGCTCGG CGAGGACGGC
GATTCCGAGT TCGGCGACCT GATCGAGGAC TCCGAGGCCG TGGTGCCCGC GGATGCCGTC
TCCTTCACGC TGCTCCAGGA GCAGCTGCAC TCGGTGCTGG ACACCCTTTC CGAGCGCGAG
GCCGGCGTCG TCGCAATGCG CTTCGGCCTG ACCGACGGCC AGCCCAAGAC GCTGGATGAG
ATCGGCAAGG TCTACGGCGT GACGCGTGAG CGGATCCGCC AGATCGAGTC GAAGACCATG
TCCAAGCTGC GTCACCCCTC CCGCTCGCAG GTGCTCCGGG ACTACCTGGA CTGA
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| Protein sequence | MQDGKETTAS EATTTRTRST AAKKSAATKS ATTKGATTRT TATKSAATKT AATPTAKKKA
TRKPTAAKTT ATAKTTATAK TTAAKKTATT GGKKATASAA SAEQAEDDEE LVQARERTEA
ADAVEEDVVA DETATEDSDD EDADGSDAPE RPAMDAEAVT GTTAATGQKV AQSKGAFVMD
DSEDDAPVQQ VVVAGATADP VKDYLKQIGK VALLNAEQEV DLAMRIEAGL YAEHVVQHEA
SDDYRERRDI QLIIADGRKA KNHLLEANLR LVVSLAKRYT GRGMLFLDLI QEGNLGLIRA
VEKFDYTKGF KFSTYATWWI RQAITRAMAD QARTIRIPVH MVEVINKLAR VQRQMLQDLG
REPTPEELAK ELDMTPEKVV EVQKYGREPI SLHTPLGEDG DSEFGDLIED SEAVVPADAV
SFTLLQEQLH SVLDTLSERE AGVVAMRFGL TDGQPKTLDE IGKVYGVTRE RIRQIESKTM
SKLRHPSRSQ VLRDYLD
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