| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3418 |
|---|
| Symbol | |
|---|
| ID | 7976196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3449415 |
|---|
| End bp | 3450515 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644800182 |
|---|
| Product | GTP-dependent nucleic acid-binding protein EngD |
|---|
| Protein accession | YP_002951321 |
|---|
| Protein GI | 239828697 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000016062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTAA CAGCAGGAAT CGTCGGTTTG CCGAACGTCG GAAAGTCGAC GCTATTTAAT
GCGATTACAA AAGCGGGAGC AGAATCTGCT AATTATCCTT TCTGTACAAT TGAACCAAAC
GTTGGTATTG TTGAAGTGCC GGATGAGCGG TTGAAAGTGT TGACGGAAAT GTTCAAACCG
CAACGTACGG TACCGACCGT GTTTGAATTT ACCGATATTG CCGGAATTGT CAAAGGGGCA
AGTAAAGGAG AGGGGCTTGG GAATAAATTT TTATCGCACA TTCGCCAAGT CGACGCCATT
TGTCAAGTTG TTCGTTGTTT TACGGATGAA AATATCACCC ATGTAGCGGG AAGAGTCGAT
CCGCTTGCGG ATATTGAAAC GATTAATTTA GAGCTAATTT TCGCCGACTT AGAAACGGTC
GATAAACGCA TAGACCGCGT CGGCAAAATA GCGAAACAAA AAGATAAAGA CGCCGTTTTT
GAATATGATA TTCTGGTGCG CCTGAAAGAA ACGTTCGAAG CAGGAAAACC AGCGCGTACG
CTTTCATTTA CAGAGGAAGA AATGAAAGTA GTCAAGCAGC TTCACCTATT AACGATCAAA
CCGATGTTAT ATGTTGCTAA TGTCGGTGAA GAGGATGTCG CTAATCCAGA TGCCAACCCG
TTCGTCAAAC AAGTTCGCGA ATTTGCGAAA AGCGACAATG CTGAAGTGAT CGTTGTTTGC
GCGAAAATTG AAGAAGAAAT CGCTCAATTG GATGATGAGG AAAAAGAGTT GTTTTTACAA
GAACTTGGCA TTCAACAATC GGGTCTAGAT CAATTAATTC GTGCATCATA TAACTTGCTT
GGATTGGCAA CGTTCTTCAC TGCAGGGGAA CAAGAAGTGC GCGCATGGAC GTTCCGCCGA
GGGATGAAAG CGCCAGAGTG CGCGGGAATT ATTCACTCCG ATTTTGAACG GGGATTTATT
CGTGCGGAAA CGGTTTCTTA CGAAGATTTA ATCACAGCTG GGTCGATGGC GGCGGCACGC
GAAGCAGGAA AAATCCGGTT GGAAGGAAAA GATTATGAAG TACAAGATGG CGATATTATT
TATTTCCGCT TCAATGTTTA A
|
|---|
| Protein sequence | MGLTAGIVGL PNVGKSTLFN AITKAGAESA NYPFCTIEPN VGIVEVPDER LKVLTEMFKP
QRTVPTVFEF TDIAGIVKGA SKGEGLGNKF LSHIRQVDAI CQVVRCFTDE NITHVAGRVD
PLADIETINL ELIFADLETV DKRIDRVGKI AKQKDKDAVF EYDILVRLKE TFEAGKPART
LSFTEEEMKV VKQLHLLTIK PMLYVANVGE EDVANPDANP FVKQVREFAK SDNAEVIVVC
AKIEEEIAQL DDEEKELFLQ ELGIQQSGLD QLIRASYNLL GLATFFTAGE QEVRAWTFRR
GMKAPECAGI IHSDFERGFI RAETVSYEDL ITAGSMAAAR EAGKIRLEGK DYEVQDGDII
YFRFNV
|
|---|
| |